LOCUS BC012303 827 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PDZK1 interacting protein 1, mRNA (cDNA clone MGC:21224 IMAGE:4469903), complete cds. ACCESSION BC012303 VERSION BC012303.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 827) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 827) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 28 Row: b Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41152089. FEATURES Location/Qualifiers source 1..827 /db_xref="H-InvDB:HIT000035749" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21224 IMAGE:4469903" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_89" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..827 /gene="PDZK1IP1" /gene_synonym="DD96" /gene_synonym="MAP17" /gene_synonym="RP1-18D14.5" /gene_synonym="SPAP" /db_xref="GeneID:10158" /db_xref="HGNC:HGNC:16887" /db_xref="MIM:607178" CDS 81..425 /gene="PDZK1IP1" /gene_synonym="DD96" /gene_synonym="MAP17" /gene_synonym="RP1-18D14.5" /gene_synonym="SPAP" /codon_start=1 /product="PDZK1 interacting protein 1" /protein_id="AAH12303.1" /db_xref="GeneID:10158" /db_xref="HGNC:HGNC:16887" /db_xref="MIM:607178" /translation="MSALSLLILGLLMAVPPASCQQGLGNLQPWMQGLIAVAVFLVLV AIAFAVKHFWCQEEPEPAHMILTVGNKADGVLVGTDGRYSSMAASFRSSEHENAYENV PEEEGKVRSTPM" BASE COUNT 191 a 248 c 223 g 165 t ORIGIN 1 gcggacacca atagactcca cagcagctcc aggagcccag acaccggcgg ccagaagcaa 61 ggctaggagc tgctgcagcc atgtcggccc tcagcctcct cattctgggc ctgctcatgg 121 cagtgccacc tgccagctgt cagcaaggcc tggggaacct tcagccctgg atgcagggcc 181 ttatcgcggt ggccgtgttc ctggtcctcg ttgcaatcgc ctttgcagtc aaacacttct 241 ggtgccagga ggagccggag cctgcacaca tgatcctgac cgtcggaaac aaggcagatg 301 gagtcctggt gggaacagat ggaaggtact cttcgatggc ggccagtttc aggtccagtg 361 agcatgagaa tgcctatgag aatgtgcccg aggaggaagg caaggtccgc agcaccccga 421 tgtaaccttc tctgtggctc caaccccaag actcccaggc acatgggatg gatgtccagt 481 gctaccaccc aagccccctc cttctttgtg tggaatctgc aatagtgggc tgactccctc 541 cagccccatg ccggccctac ccgcccttga agtatagcca gccaaggttg gagctcagac 601 cgtgtctagg ttggggctcg gctgtggccc tggggtctcc tgctcagctc agaagagcct 661 tctggagagg acagtcagct gagcacctcc catcctgctc acacgtcctt ccccataact 721 atggaaatgg ccctaatttc tgtgaaataa agactttttg tatttctggg gctgaggctc 781 agcaacagcc cctcaggctt ccaaaaaaaa aaaaaaaaaa aaaaaaa //