LOCUS BC012302 2149 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3, mRNA (cDNA clone MGC:9893 IMAGE:3868681), complete
cds.
ACCESSION BC012302
VERSION BC012302.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2149)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2149)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777611.
FEATURES Location/Qualifiers
source 1..2149
/db_xref="H-InvDB:HIT000035748"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9893 IMAGE:3868681"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2149
/gene="PSMD3"
/gene_synonym="P58"
/gene_synonym="RPN3"
/gene_synonym="S3"
/db_xref="GeneID:5709"
/db_xref="HGNC:HGNC:9560"
CDS 152..1756
/gene="PSMD3"
/gene_synonym="P58"
/gene_synonym="RPN3"
/gene_synonym="S3"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3"
/protein_id="AAH12302.1"
/db_xref="GeneID:5709"
/db_xref="HGNC:HGNC:9560"
/translation="MKQEGSARRRGADKAKPPPGGGEQEPPPPPAPQDVEMKEEAATG
GGSTGEADGKTAAAAAEHSQRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLP
STSRRLNHYVLYKAVQGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASNTLL
PEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVY
EFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVF
PEQANNNEWARYLYYTGRIKAIQLEYSVARRTMTNALRKAPQHTAVGFKQTVHKLLIV
VELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTY
TLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEAS
INHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESA
EERREREQQDLEFAKEMAEDDDDSFP"
BASE COUNT 487 a 615 c 631 g 416 t
ORIGIN
1 ccgggaaggg gtttgcagct gctccgtcat cgtgcggccc gacgctatct cgcgctcgtg
61 tgcaggcccg gctcggctcc tggtccccgg tgcgagggtt aacgcgaggc cccggcctcg
121 gtccccggac taggccgtga ccccgggtgc catgaagcag gagggctcgg cgcggcgccg
181 cggcgcggac aaggcgaaac cgccgcccgg cggaggagaa caagaacccc caccgccgcc
241 ggccccccag gatgtggaga tgaaagagga ggcagcgacg ggtggcgggt caacggggga
301 ggcagacggc aagacggcgg cggcagcggc tgagcactcc cagcgagagc tggacacagt
361 caccttggag gacatcaagg agcacgtgaa acagctagag aaagcggttt caggcaagga
421 gccgagattc gtgctgcggg ccctgcggat gctgccttcc acatcacgcc gcctcaacca
481 ctatgttctg tataaggctg tgcagggctt cttcacttca aataatgcca ctcgagactt
541 tttgctcccc ttcctggaag agcccatgga cacagaggct gatttacagt tccgtccccg
601 cacgggaaaa gctgcgtcga acaccctcct gcctgaagtg gaagcctatc tccaactcct
661 cgtggtcatc ttcatgatga acagcaagcg ctacaaagag gcacagaaga tctctgatga
721 tctgatgcag aagatcagta ctcagaaccg ccgggcccta gaccttgtag ccgcaaagtg
781 ttactattat cacgcccggg tctatgagtt cctggacaag ctggatgtgg tgcgcagctt
841 cttgcatgct cggctccgga cagctacgct tcggcatgac gcagacgggc aggccaccct
901 gttgaacctc ctgctgcgga attacctaca ctacagcttg tacgaccagg ctgagaagct
961 ggtgtccaag tctgtgttcc cagagcaggc caacaacaat gagtgggcca ggtacctcta
1021 ctacacaggg cgaatcaaag ccatccagct ggagtactca gtggcccgga gaacgatgac
1081 caacgccctt cgcaaggccc ctcagcacac agctgtcggc ttcaaacaga cggtgcacaa
1141 gcttctcatc gtggtggagc tgttgctggg ggagatccct gaccggctgc agttccgcca
1201 gccctccctc aagcgctcac tcatgcccta tttccttctg actcaagctg tcaggacagg
1261 aaacctagcc aagttcaacc aggtcctgga tcagtttggg gagaagtttc aagcagatgg
1321 gacctacacc ctaattatcc ggctgcggca caacgtgatt aagacaggtg tacgcatgat
1381 cagcctctcc tattcccgaa tctccttggc tgacatcgcc cagaagctgc agttggatag
1441 ccccgaagat gcagagttca ttgttgccaa ggccatccgg gatggtgtca ttgaggccag
1501 catcaaccac gagaagggct atgtccaatc caaggagatg attgacatct attccacccg
1561 agagccccag ctagccttcc accagcgcat ctccttctgc ctagatatcc acaacatgtc
1621 tgtcaaggcc atgaggtttc ctcccaaatc gtacaacaag gacttggagt ctgcagagga
1681 acggcgtgag cgagaacagc aggacttgga gtttgccaag gagatggcag aagatgatga
1741 tgacagcttc ccttgagctg gggggctggg gaggggtagg gggaatgggg acaggctctt
1801 tcccccttgg gggtcccctg cccagggcac tgtccccatt ttcccacaca cagctcatat
1861 gctgcattcg tgcagggggt gggggtgctg ggagccagcc accctgacct cccccagggc
1921 tcctccccag ccggtgactt actgtacagc aggcaggagg gtgggcaggc aacctccccg
1981 ggcagggtcc tggccagcag tgtgggagca ggaggggaag gatagttctg tgtactcctt
2041 tagggagtgg gggactagaa ctgggatgtc ttggcttgta tgttttttga agcttcgatt
2101 atgattttta aacaataaaa agttctccac agtgaaaaaa aaaaaaaaa
//