LOCUS BC012302 2149 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:9893 IMAGE:3868681), complete cds. ACCESSION BC012302 VERSION BC012302.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2149) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2149) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: h Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777611. FEATURES Location/Qualifiers source 1..2149 /db_xref="H-InvDB:HIT000035748" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9893 IMAGE:3868681" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2149 /gene="PSMD3" /gene_synonym="P58" /gene_synonym="RPN3" /gene_synonym="S3" /db_xref="GeneID:5709" /db_xref="HGNC:HGNC:9560" CDS 152..1756 /gene="PSMD3" /gene_synonym="P58" /gene_synonym="RPN3" /gene_synonym="S3" /codon_start=1 /product="proteasome (prosome, macropain) 26S subunit, non-ATPase, 3" /protein_id="AAH12302.1" /db_xref="GeneID:5709" /db_xref="HGNC:HGNC:9560" /translation="MKQEGSARRRGADKAKPPPGGGEQEPPPPPAPQDVEMKEEAATG GGSTGEADGKTAAAAAEHSQRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLP STSRRLNHYVLYKAVQGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASNTLL PEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVY EFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVF PEQANNNEWARYLYYTGRIKAIQLEYSVARRTMTNALRKAPQHTAVGFKQTVHKLLIV VELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTY TLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEAS INHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESA EERREREQQDLEFAKEMAEDDDDSFP" BASE COUNT 487 a 615 c 631 g 416 t ORIGIN 1 ccgggaaggg gtttgcagct gctccgtcat cgtgcggccc gacgctatct cgcgctcgtg 61 tgcaggcccg gctcggctcc tggtccccgg tgcgagggtt aacgcgaggc cccggcctcg 121 gtccccggac taggccgtga ccccgggtgc catgaagcag gagggctcgg cgcggcgccg 181 cggcgcggac aaggcgaaac cgccgcccgg cggaggagaa caagaacccc caccgccgcc 241 ggccccccag gatgtggaga tgaaagagga ggcagcgacg ggtggcgggt caacggggga 301 ggcagacggc aagacggcgg cggcagcggc tgagcactcc cagcgagagc tggacacagt 361 caccttggag gacatcaagg agcacgtgaa acagctagag aaagcggttt caggcaagga 421 gccgagattc gtgctgcggg ccctgcggat gctgccttcc acatcacgcc gcctcaacca 481 ctatgttctg tataaggctg tgcagggctt cttcacttca aataatgcca ctcgagactt 541 tttgctcccc ttcctggaag agcccatgga cacagaggct gatttacagt tccgtccccg 601 cacgggaaaa gctgcgtcga acaccctcct gcctgaagtg gaagcctatc tccaactcct 661 cgtggtcatc ttcatgatga acagcaagcg ctacaaagag gcacagaaga tctctgatga 721 tctgatgcag aagatcagta ctcagaaccg ccgggcccta gaccttgtag ccgcaaagtg 781 ttactattat cacgcccggg tctatgagtt cctggacaag ctggatgtgg tgcgcagctt 841 cttgcatgct cggctccgga cagctacgct tcggcatgac gcagacgggc aggccaccct 901 gttgaacctc ctgctgcgga attacctaca ctacagcttg tacgaccagg ctgagaagct 961 ggtgtccaag tctgtgttcc cagagcaggc caacaacaat gagtgggcca ggtacctcta 1021 ctacacaggg cgaatcaaag ccatccagct ggagtactca gtggcccgga gaacgatgac 1081 caacgccctt cgcaaggccc ctcagcacac agctgtcggc ttcaaacaga cggtgcacaa 1141 gcttctcatc gtggtggagc tgttgctggg ggagatccct gaccggctgc agttccgcca 1201 gccctccctc aagcgctcac tcatgcccta tttccttctg actcaagctg tcaggacagg 1261 aaacctagcc aagttcaacc aggtcctgga tcagtttggg gagaagtttc aagcagatgg 1321 gacctacacc ctaattatcc ggctgcggca caacgtgatt aagacaggtg tacgcatgat 1381 cagcctctcc tattcccgaa tctccttggc tgacatcgcc cagaagctgc agttggatag 1441 ccccgaagat gcagagttca ttgttgccaa ggccatccgg gatggtgtca ttgaggccag 1501 catcaaccac gagaagggct atgtccaatc caaggagatg attgacatct attccacccg 1561 agagccccag ctagccttcc accagcgcat ctccttctgc ctagatatcc acaacatgtc 1621 tgtcaaggcc atgaggtttc ctcccaaatc gtacaacaag gacttggagt ctgcagagga 1681 acggcgtgag cgagaacagc aggacttgga gtttgccaag gagatggcag aagatgatga 1741 tgacagcttc ccttgagctg gggggctggg gaggggtagg gggaatgggg acaggctctt 1801 tcccccttgg gggtcccctg cccagggcac tgtccccatt ttcccacaca cagctcatat 1861 gctgcattcg tgcagggggt gggggtgctg ggagccagcc accctgacct cccccagggc 1921 tcctccccag ccggtgactt actgtacagc aggcaggagg gtgggcaggc aacctccccg 1981 ggcagggtcc tggccagcag tgtgggagca ggaggggaag gatagttctg tgtactcctt 2041 tagggagtgg gggactagaa ctgggatgtc ttggcttgta tgttttttga agcttcgatt 2101 atgattttta aacaataaaa agttctccac agtgaaaaaa aaaaaaaaa //