LOCUS BC012289 1728 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens HLA-B associated transcript 2-like, mRNA (cDNA clone IMAGE:3866664), complete cds. ACCESSION BC012289 VERSION BC012289.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1728) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1728) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: l Column: 14 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1728 /db_xref="H-InvDB:HIT000035739" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3866664" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1728 /gene="BAT2L" /gene_synonym="LQFBS-1" /gene_synonym="RP11-334J6.1" /db_xref="GeneID:84726" /db_xref="HGNC:HGNC:28121" CDS 257..1237 /gene="BAT2L" /gene_synonym="LQFBS-1" /gene_synonym="RP11-334J6.1" /codon_start=1 /product="BAT2L protein" /protein_id="AAH12289.1" /db_xref="GeneID:84726" /db_xref="HGNC:HGNC:28121" /translation="MPPMPVASVAPSASMPGSHLPPLYLDGHVFASQPRLVPQTIPQQ QSYQQAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLS PPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYEGQLSQAAGL GASQMLDSQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPV LNTSREPSQMEMKGFHFADSKQNVPSGGPVPSPQTYRPSSASPSGKPSGSAVNMGSVQ GHYVQQAKQRVDEKPSLGAVKLQEAPSAASQMKRTGAIKPRAVKVEESKA" BASE COUNT 367 a 587 c 442 g 332 t ORIGIN 1 cagtaatgca gggttaacac agagtatccc catcctgcgg cgggaccatc acatccagag 61 ggccatcggt ctctccccaa tgtccttccc caccgccgac cttactctga agatggagtc 121 tgcgcgcaag gcttgggaaa actcccccag tttgccggag cagagctctc caggcggcgc 181 tggctcaggc atccagcctc catcctctgt gggtgcctcc agcggggtca actacagctc 241 cttcggtgga gtgtccatgc cacccatgcc tgtggcctct gtagcacctt ctgcttctat 301 gccaggcagc cacctcccgc ccctgtacct ggatggccat gtgtttgcaa gtcagccccg 361 gctggttcct caaacgatac ctcagcagca gagttaccaa caggccgccg ctgcccagca 421 gatcccgatc tcccttcaca catctctgca ggcacaagct cagcttggac tgaggggtgg 481 gcttcctgtg tcccagtccc aggagatctt cagctccttg cagcccttca gatctcaggt 541 gtacatgcac cccagcctgt caccgcccag caccatgatc ctctctgggg gcacagcctt 601 gaagcctcca tactcggcgt tcccaggcat gcagcccttg gagatggtga agccgcagtc 661 tggctcaccc taccagccca tgagcgggaa ccaagccctg gtctacgagg gccagctcag 721 ccaggctgct ggcctgggtg cctcccagat gttggactcc cagctcccac agctgaccat 781 gccactgcct cggtacggct ccgggcagca gccactgatc ctgccccagt ctattcagct 841 gccacctggg cagagcctct ccgttggggc cccccgaagg attcctccgc ccgggtccca 901 gccgccagtc ctgaacacca gcagagagcc ctctcagatg gagatgaaag gcttccactt 961 tgccgacagt aaacagaatg tcccttcagg aggccccgtg ccatcgccac agacctacag 1021 gcctagctct gctagcccca gtgggaagcc ctctggatca gcagttaaca tgggctctgt 1081 gcagggacac tacgtgcaac aggcaaaaca acgagtggat gagaaaccca gcctgggagc 1141 cgtgaagctg caggaggccc cctcggctgc ctcccagatg aagcgaaccg gagcgatcaa 1201 gcctcgggct gtcaaagtgg aggagagtaa ggcctgacag tgcctggctg ccacctcgcc 1261 tctccctact gaggacggtg ccgccatgcg gcctcgacac agccgacact cgggagcctc 1321 accagatcca ccgtccaaat gcgtggccca gactgagaga cctccctcct ctccactccc 1381 gaaagctccg ttgtcaacca gcttgcaccc gtggatatat ggcattgacc cgcttgcttt 1441 gatacgaaac aaaaaagcag acgactcctt catcccatct gctcctaccg tgactgtgga 1501 gtgacgcctc ctgtgcagtg cagatttgcc ctccctgcct cctccctgtc ctgccgcgca 1561 gccagggcgc cttctcagca gtgcttccgg cccagccgcc catccctagg cacagtgatt 1621 tggcagcagg gtcattttac tttgaggctt tttgttttaa aatgtagcca aggtttttac 1681 aaaggggaaa ggaaaagaaa acaaaaacgc aaaaaaaaaa aaaaaaaa //