LOCUS BC012204 949 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens fibronectin type III domain containing 3B, mRNA (cDNA
clone IMAGE:3882800), complete cds.
ACCESSION BC012204
VERSION BC012204.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 949)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 949)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27477058
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..949
/db_xref="H-InvDB:HIT000035733"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3882800"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..949
/gene="FNDC3B"
/gene_synonym="DKFZp762K137"
/gene_synonym="FAD104"
/gene_synonym="FLJ23399"
/gene_synonym="PRO4979"
/gene_synonym="YVTM2421"
/db_xref="GeneID:64778"
CDS 183..386
/gene="FNDC3B"
/gene_synonym="DKFZp762K137"
/gene_synonym="FAD104"
/gene_synonym="FLJ23399"
/gene_synonym="PRO4979"
/gene_synonym="YVTM2421"
/codon_start=1
/product="FNDC3B protein"
/protein_id="AAH12204.1"
/db_xref="GeneID:64778"
/translation="MMMTDQIPLELPPLLNGEVAMMPHLVNGDAAQQVILVQVNPGET
FTIRAEDGTLQCIQDEVVKRACD"
BASE COUNT 261 a 188 c 232 g 268 t
ORIGIN
1 gcggcggcgg cggctggagg aggagagcgg cggcggcggg agcagcgaag ggggcggcag
61 ggatcctcca ggctgccggc tgggaaggcg tgggcgaccc ggtgtgtggc gcgcccagag
121 ccccgcgttt cagccctagg gaaggaagcc agttgaggga agttctccaa atgtacgtca
181 caatgatgat gaccgaccaa atccctctgg aactgccacc attgctgaac ggagaggtag
241 ccatgatgcc ccacttggtg aatggagatg cagctcagca ggttattctc gttcaagtta
301 atccaggtga gactttcaca ataagagcag aggatggaac acttcagtgc attcaagatg
361 aagtggtgaa gagagcctgc gattgaagat tttttcatct cagctttttc ccccttacct
421 tgttctctct catgtttcat gatctgtgtc atagatattt cttcattacg agcacttcgc
481 ggtgtggctt ttcaatgtct gaagtggatt aagtggccca cagtcagttc tgtgacttga
541 gtttcaaaag taaaattacc atcaacaatg tgattcaatt ttattttcta tactagctaa
601 aagcaaggaa ctatattatt aacaatcttg gctttactgt agtttaaggc aggtgatgat
661 gatgcttatt agtccacctg aaagagtcct tccaggtttt tggaagcttt attcctgctt
721 attaccttgc ccttgagaag tccttcatgg aaagtggaaa cactgggttg acttcttttc
781 cccatatcct agttgaaagg gacagcttat atgtatgtta gactgtccaa aagtgtttgt
841 agaacctcat tttaaaaaat caactgtatt gtacttttta aaaaatggga tcttaaactc
901 tttattaaaa ataataaatg gaaatgtgtt aagcaaaaaa aaaaaaaaa
//