LOCUS BC012196 1277 bp mRNA linear HUM 02-JAN-2004
DEFINITION Homo sapiens chromosome 20 open reading frame 27, mRNA (cDNA clone
MGC:4349 IMAGE:2822218), complete cds.
ACCESSION BC012196
VERSION BC012196.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1277)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923517.
FEATURES Location/Qualifiers
source 1..1277
/db_xref="H-InvDB:HIT000035729"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4349 IMAGE:2822218"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1277
/gene="C20orf27"
/gene_synonym="FLJ20550"
/db_xref="GeneID:54976"
CDS 156..680
/gene="C20orf27"
/gene_synonym="FLJ20550"
/codon_start=1
/product="C20orf27 protein"
/protein_id="AAH12196.1"
/db_xref="GeneID:54976"
/translation="MAAANKGNKPRVRSIRFAAGHDAEGSHSHVHFDEKLHDSVVMVT
QESDSSFLVKVGFLKILHRYEITFTLPPVHRLSKDVREAPVPSLHLKLLSVVPVPEGY
SVKCEYSAHKEGVLKEEILLACEGGTGTCVRVTVQARVMDRHHGTPMLLDGVKCVGAE
LEYDSEHSDWHGFD"
BASE COUNT 258 a 398 c 377 g 244 t
ORIGIN
1 agctcctgca gccgccgccg ctgcagtggt cgtccctgcc ctccccggcc ccggggtgca
61 ccccgcaagg ctcccgctgg tgtccctgga gcatgggagg ctgctgagcg tgagtggcgg
121 tgtctggcag gagctgcgtg gcagggaggg cgtccatggc tgcagccaac aagggcaaca
181 agcccagagt ccggagtatc cgctttgcgg caggccacga tgcagaagga tcccacagcc
241 acgtccactt tgatgagaag ctgcatgact cggtggtcat ggtcacccag gagagtgaca
301 gcagctttct ggtcaaggtt ggcttcctga agatcctgca caggtatgag attaccttca
361 ctctgccccc agtgcacagg ctgagcaagg atgtccgcga ggcacctgtc cccagcctgc
421 acctcaagct cctcagcgtg gtgcccgtcc ctgaaggtta tagtgtcaag tgtgagtact
481 cggcgcacaa agagggcgtc ctcaaagagg agatactgct agcctgcgaa ggtggcactg
541 gcacctgtgt gcgcgtgacg gtgcaggccc gcgtcatgga ccggcaccac ggcacgccca
601 tgctgctgga tggtgtcaag tgtgtgggcg ccgagctgga atacgactca gagcacagcg
661 actggcacgg ctttgactga ggcccgaggc cccgcctgcc ccgggcccct cagccttaaa
721 ccccgccttg tccccccgac atgctgcgtg atggtgtggc ttcctcgccc ctctctgggg
781 tgggtgtggg ggtggagtgg ccttgcccac gcctctcacc tctgccttca tttgtgctgc
841 caccctgccc ctccctcgtc ctcctctccc acttcctcct ctctgtgtgc ctcagtctcc
901 tgccggaaga aatgggttga gcccgaaagg aggctgtctg aggaagggag agggagggcc
961 tggggtgggt cccccactcc ccaccccaag ccacagggac tcccaccagg gtttgggaga
1021 ggacggagct ggctctgtgg cgtcgtggcc ccattaatgt tgccttgctt cagccacctc
1081 tcctgcccct ccctagtccc cactgctgtc caccatgagt aggagggagg tgcagtcccc
1141 agcccccacc cctcaggtct gtgttacttg gtttttaagc gactggttgg gatagaaccc
1201 taaagaaata aacttccagt ggataccgga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaa
//