LOCUS BC012186 2623 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens PDZ domain containing 8, mRNA (cDNA clone
IMAGE:4564853), partial cds.
ACCESSION BC012186
VERSION BC012186.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2623)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..2623
/db_xref="H-InvDB:HIT000087802"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4564853"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 672 a 691 c 703 g 557 t
ORIGIN
1 ccgctgcggg ctcgggcgcc gcagcgcgcc ggcccgagcc cctggacgag gcccacggag
61 ccgctcgccc cgacccagcc gcccgatgtc ctcaaaatgg aggcagcggg ggcggcggcg
121 tgaagaaagc ggcgctgtgg gcgcgggagt aggggcccgg gcggaggcgg tggcgggatg
181 gggctgctgc tcatgatcct ggcgtcggcc gtgctgggtt ccttcctcac gctcctcgcc
241 cagttcttcc tgctgtaccg cagacagccc gagccgccgg cggacgaggc cgcccgcgcg
301 ggcgagggct tccgctacat caagccagtg ccgggcctgc tcctaaggga gtacctttat
361 ggcggcggcc gggatgagga gccctccgga gcggcccctg agggcggcgc gacccccacc
421 gcggcccccg agacccccgc cccgccgacg cgggagactt gctacttcct caacgccacc
481 atcctattcc tgttccggga gttgcgggac accgcgctga cccgccgctg ggtcaccaag
541 aagatcaagg tggagttcga ggagctgctg cagaccaaga cggccgggcg cctgctggag
601 gggctgagcc tgcgggacgt gttcctgggc gagacggtgc ccttcatcaa gaccatccgg
661 ctcgtgcggc cagtcgtgcc ctcggccacc ggggagcccg atggccctga aggggaggcg
721 ctgcccgccg cctgccccga ggagctggcc ttcgaggcgg aggtggagta caacgggggc
781 ttccacctgg ccatcgacgt ggacctggtc ttcggcaagt ccgcctactt gtttgtcaag
841 ctgtcccgcg tggtgggaag gctgcgcttg gtctttacgc gcgtgccctt cacccactgg
901 ttcttctcct tcgtggaaga cccgctgatc gacttcgagg tgcgctccca gtttgaaggg
961 cggcccatgc cccagctcac ctccatcatc gtcaaccagc tcaagaagat catcaagcgc
1021 aagcacaccc taccgaatta caagatcagg tttaagccgt tttttccata ccagaccttg
1081 caaggatttg aagaagatga agagcatatc catatacaac aatgggcact tactgaaggc
1141 cgtcttaaag ttacgttgtt agaatgtagc aggttactca tttttggatc ctatgacaga
1201 gaggcaaatg ttcattgcac acttgagtta agcagtagtg tttgggaaga aaaacagagg
1261 agttctatta agacggttga attaataaaa ggaaatttac aaagtgttgg acttacactt
1321 cgtcttgtcc agtcaactga tgggtatgct gggcacgtca tcattgaaac tgtggctcca
1381 aactcgcctg ctgcaattgc agatcttcag cggggagatc gacttatcgc cattggaggt
1441 gtgaaaatca catcaacact gcaagtgttg aagcttatca agcaggctgg tgaccgagtc
1501 ctggtgtact atgaaaggcc tgttggccag agtaatcaag gtgcagtgct gcaagataac
1561 tttggccagt tggaagaaaa ctttttgtca agctcatgcc aatcgggtta tgaagaggaa
1621 gctgccgggt tgacagtaga tactgaaagt agagagctgg attctgaatt tgaagacttg
1681 gcaagtgatg tcagagcaca aaatgagttc aaagatgagg cacaatcatt aagtcatagt
1741 cccaaacgtg ttccaacaac actttctatt aaaccccttg gagctatatc accagtttta
1801 aaccgtaaat tagctgtagg aagtcaccca ctaccaccga aaattcagtc caaagatgga
1861 aataaacctc cacccctaaa aacttctgag ataacagacc cagcacaagt gtcaaaacca
1921 acccaaggat ctgctttcaa accacctgtg ccaccacgac cacaagcgaa agttcctttg
1981 ccttccgccg atgctccaaa tcaggcagaa ccagatgttc tcgttgaaaa gccagagaag
2041 gtggtgccac ctcctcttgt agataaatct gctgaaaagc aagcaaaaaa tgtggatgcc
2101 atagacgatg cagctgcacc taagcaattt ttagcaaagc aagaagtggc caaagatgtc
2161 acttcagaaa cttcctgccc tactaaggac agttcggacg accgtcaaac atgggaatca
2221 tcagaaattc tttatcgtaa taagctagga aaatggacaa gaaccagagc atcctgtttg
2281 tttgacatag aagcctgtca caggtactta aacattgcat tgtggtgcag ggatcctttc
2341 aagttgggag gtctcatctg tttggggcat gttagtttaa aacttgaaga tgtggcttta
2401 ggatgcctag ctacatcaaa cacggaatac ctttccaaat tgagactgga agccccctca
2461 cctaaggcta tagtcactag aaccgcacta cgcaatctga gtatgcaaaa gggattcaat
2521 gacaaatttt gctatggtga cattactatt cacttcaaat atttgaaaga aggagaatca
2581 gaccaccatg tagttactaa cgtagaaaaa aaaaaaaaaa aaa
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