LOCUS BC012160 1323 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens CD27 molecule, mRNA (cDNA clone MGC:20393
IMAGE:4575359), complete cds.
ACCESSION BC012160
VERSION BC012160.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1323)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1323)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23510435.
FEATURES Location/Qualifiers
source 1..1323
/db_xref="H-InvDB:HIT000035700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20393 IMAGE:4575359"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1323
/gene="CD27"
/gene_synonym="MGC20393"
/gene_synonym="S152"
/gene_synonym="T14"
/gene_synonym="Tp55"
/db_xref="GeneID:939"
/db_xref="HGNC:HGNC:11922"
/db_xref="MIM:186711"
CDS 198..980
/gene="CD27"
/gene_synonym="MGC20393"
/gene_synonym="S152"
/gene_synonym="T14"
/gene_synonym="Tp55"
/codon_start=1
/product="CD27 molecule"
/protein_id="AAH12160.1"
/db_xref="GeneID:939"
/db_xref="HGNC:HGNC:11922"
/db_xref="MIM:186711"
/translation="MARPHPWWLCVLGTLVGLSATPAPKSCPERHYWAQGKLCCQMCE
PGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANA
ECACRNGWQCRDKECTECDPLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHM
QTLADFRQLPARTLSTHWPPQRSLCSSDFIRILVIFSGMFLVFTLAGALFLHQRRKYR
SNKGESPVEPAEPCRYSCPREEEGSTIPIQEDYRKPEPACSP"
BASE COUNT 313 a 400 c 364 g 246 t
ORIGIN
1 gtggaggttg ctgctatgag agagaaaaaa aaaaacagcc acaatagaga ttctgccttc
61 aaaggttggc ttgccacctg aagcagccac tgcccagggg gtgcaaagaa gagacagcag
121 cgcccagctt ggaggtgcta actccagagg ccagcatcag caactgggca cagaaaggag
181 ccgcctgggc agggaccatg gcacggccac atccctggtg gctgtgcgtt ctggggaccc
241 tggtggggct ctcagctact ccagccccca agagctgccc agagaggcac tactgggctc
301 agggaaagct gtgctgccag atgtgtgagc caggaacatt cctcgtgaag gactgtgacc
361 agcatagaaa ggctgctcag tgtgatcctt gcataccggg ggtctccttc tctcctgacc
421 accacacccg gccccactgt gagagctgtc ggcactgtaa ctctggtctt ctcgttcgca
481 actgcaccat cactgccaat gctgagtgtg cctgtcgcaa tggctggcag tgcagggaca
541 aggagtgcac cgagtgtgat cctcttccaa acccttcgct gaccgctcgg tcgtctcagg
601 ccctgagccc acaccctcag cccacccact taccttatgt cagtgagatg ctggaggcca
661 ggacagctgg gcacatgcag actctggctg acttcaggca gctgcctgcc cggactctct
721 ctacccactg gccaccccaa agatccctgt gcagctccga ttttattcgc atccttgtga
781 tcttctctgg aatgttcctt gttttcaccc tggccggggc cctgttcctc catcaacgaa
841 ggaaatatag atcaaacaaa ggagaaagtc ctgtggagcc tgcagagcct tgtcgttaca
901 gctgccccag ggaggaggag ggcagcacca tccccatcca ggaggattac cgaaaaccgg
961 agcctgcctg ctccccctga gccagcacct gcggtagctg cactacagcc ctggcctcca
1021 cccccacccc gccgaccatc caagggagag tgagacctgg cagccacaac tgcagtccca
1081 tcctcttgtc agggcccttt cctgtgtaca cgtgacagag tgccttttcg agactggcag
1141 ggacgaggac aaatatggat gaggtggaga gtgggaagca ggagcccagc cagctgcgcc
1201 tgcgctgcag gagggcgggg gctctggttg taaaacacac ttcctgctgc gaaagaccca
1261 catgctacaa gacgggcaaa ataaagtgac agatgaccac cctgcaaaaa aaaaaaaaaa
1321 aaa
//