LOCUS       BC012137                1792 bp    mRNA    linear   HUM 19-JUN-2006
DEFINITION  Homo sapiens syntaxin 5, mRNA (cDNA clone MGC:20229 IMAGE:4560294),
            complete cds.
ACCESSION   BC012137
VERSION     BC012137.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1792)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 29 Row: e Column: 12
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, Similarity but not identity to protein.
FEATURES             Location/Qualifiers
     source          1..1792
                     /db_xref="H-InvDB:HIT000035685"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:20229 IMAGE:4560294"
                     /tissue_type="Kidney, renal cell adenocarcinoma"
                     /clone_lib="NIH_MGC_14"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1792
                     /gene="STX5"
                     /gene_synonym="SED5"
                     /db_xref="GeneID:6811"
                     /db_xref="HGNC:HGNC:11440"
                     /db_xref="MIM:603189"
     CDS             135..1202
                     /gene="STX5"
                     /gene_synonym="SED5"
                     /codon_start=1
                     /product="syntaxin 5"
                     /protein_id="AAH12137.2"
                     /db_xref="GeneID:6811"
                     /db_xref="HGNC:HGNC:11440"
                     /db_xref="MIM:603189"
                     /translation="MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPP
                     VTLVPPPPDTMSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIG
                     KDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAK
                     GSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSA
                     LPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNI
                     ESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRW
                     LMVKIFLILIVFFIIFVVFLA"
BASE COUNT          418 a          517 c          471 g          386 t
ORIGIN      
        1 gtgacgtggc cgcttccagt ctttggtcgg gtttcggcgg cttcagtgct cggggaggag
       61 gcagtgacgg ccggtgagat tggaagtggc ggcggcggca ggcggcagag gggagtccga
      121 ggttatgcgt ctcaatgatc ccgcggaaac gctacgggtc taagaacacg gatcagggtg
      181 tctacctggg tctctcaaag acacaggtcc tgtcccctgc aactgctggc agtagcagca
      241 gcgacatcgc ccctctgccc cccccagtga ccctcgtccc tccccctccc gacaccatgt
      301 cctgccggga tcggacccag gagtttctgt ctgcctgcaa gtcgctgcag acccgtcaga
      361 atggaatcca gacaaataag ccagctttgc gtgctgtccg acaacgcagt gaattcaccc
      421 tcatggccaa gcgcattggg aaagacctta gcaacacatt tgccaagctg gagaagctga
      481 caatcttggc aaagcgcaag tccctctttg atgataaagc agtggaaatt gaagagctaa
      541 catatatcat caaacaggac atcaatagcc tcaacaaaca aattgctcag ctccaggatt
      601 tcgtgagagc caagggcagc cagagtggcc ggcacctgca gacccactcc aacaccattg
      661 tggtctcctt gcagtcgaaa ctggcttcta tgtccaatga cttcaaatcg gttttagaag
      721 tgaggacaga gaacctgaag cagcagagga gccggagaga gcagttctcc cgggcacctg
      781 tgtcagccct gccccttgcc cctaaccacc tgggcggtgg tgctgtggtt ctgggggcag
      841 agtcccatgc ctccaaggat gtcgccatcg acatgatgga ctctcggacc agccagcagc
      901 tgcagctcat tgacgagcag gattcctaca tccagagtcg ggcagacacc atgcagaaca
      961 ttgagtcgac aattgttgag ttgggctcca tctttcagca gttggcacac atggttaagg
     1021 aacaggagga aaccattcag aggatcgacg agaacgtgct aggagcccag ctggacgttg
     1081 aggccgccca ttcagagatc ctcaagtact tccagtctgt cacctccaac cggtggctca
     1141 tggtcaaaat cttcctcatc ctcattgtct tcttcatcat ctttgtggtc ttccttgctt
     1201 gaaccctctc tactctgagg cactctgttg gggtttggga ccctcctggg aaggcaagtg
     1261 gccagtgctg ccactgagcc tgtgcagggt acttgggaga aaggccctgt ttccctggaa
     1321 ctgctaagaa tgaccactgc ccctgatccc ccaccccttg cctctggcca ccctgtcttc
     1381 cccccaccac cctcaggcct atgaaacaca cagggttcta gatttgaact ctgctgtgaa
     1441 gtgactggaa gggagcagag gccagctggg ggccagtggg ggaggttgtt tccactagga
     1501 gatttttata aaccctctcc agcctctccc aaaggaagcg ttggcagcaa agggagatga
     1561 tgcccttacc caccttcctg tgagtgaaga gaggaagcag ccccagggac caattttccc
     1621 aattgacctc tttcttcctc tttcaccatg tgaggcaggg agccctgagc ccttcagctg
     1681 cctgcacaac ccctgacatt ggctgctggt gactcaatct gccaaatgtg ctgcagctcg
     1741 ttttctccca attacagcaa gactgtcagc ctcaaaaaaa aaaaaaaaaa aa
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