LOCUS BC012123 2655 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens golgi phosphoprotein 3 (coat-protein), mRNA (cDNA
clone MGC:20187 IMAGE:4558305), complete cds.
ACCESSION BC012123
VERSION BC012123.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2655)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2655)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29550859.
FEATURES Location/Qualifiers
source 1..2655
/db_xref="H-InvDB:HIT000035676"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20187 IMAGE:4558305"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2655
/gene="GOLPH3"
/gene_synonym="FLJ90675"
/gene_synonym="GOPP1"
/gene_synonym="GPP34"
/db_xref="GeneID:64083"
/db_xref="HGNC:HGNC:15452"
CDS 241..1137
/gene="GOLPH3"
/gene_synonym="FLJ90675"
/gene_synonym="GOPP1"
/gene_synonym="GPP34"
/codon_start=1
/product="golgi phosphoprotein 3 (coat-protein)"
/protein_id="AAH12123.1"
/db_xref="GeneID:64083"
/db_xref="HGNC:HGNC:15452"
/translation="MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRR
DEQDDDDKGDSKETRLTLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGR
LQLEACGMRRKSLLTRKVICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGET
WNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQ
EAVLDKWVNDPHRMDRRLLALIYLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDP
EVECLKANTNEVLWAVVAAFTK"
BASE COUNT 698 a 579 c 583 g 795 t
ORIGIN
1 gtgacgggga ctgcggccac aggcaggaag gcgctcctct cctgccccgc cgacgcccgg
61 ccagcccgct tcgccctgac ctgtttcctc atgactgccc ccggccctgc tgccgacgga
121 cgtcgccccg gcgtccggat ttaacacgga aacccggatc ggaggccgcg cggggaggag
181 gagggcgacc cggtcggtcc tgcgaccctc tcggcccggc tcggcgcctc ggcgggagcc
241 atgacctcgc tgacccagcg cagctccggc ctggtgcagc ggcgcaccga ggcctcccgc
301 aacgccgccg acaaggagcg ggcggcgggc ggcggcgccg gcagcagcga ggacgacgcg
361 cagagccgcc gcgacgagca ggacgacgac gacaagggcg actccaagga aacgcggctg
421 accctgatgg aggaagtgct cctgctgggc ctcaaggacc gcgagggtta cacatcattt
481 tggaatgact gtatatcatc tggattacgt ggctgtatgt taattgaatt agcattgaga
541 ggaaggttac aactagaggc ttgtggaatg agacgtaaaa gtctattaac aagaaaggta
601 atctgtaagt cagatgctcc aacaggggat gttcttcttg atgaagctct gaagcatgtt
661 aaggaaactc agcctccaga aacggtccag aactggattg aattacttag tggtgagaca
721 tggaatccat taaaattgca ttatcagtta agaaatgtac gggaacgatt agctaaaaac
781 ctggtggaaa agggtgtatt gacaacagag aaacagaact tcctactttt tgacatgaca
841 acacatcccc tcaccaataa caacattaag cagcgcctca tcaagaaagt acaggaagcc
901 gttcttgaca aatgggtgaa tgaccctcac cgcatggaca ggcgcttgct ggccctcatt
961 tacctggctc atgcctcgga cgtcctggag aatgcttttg ctcctcttct ggacgagcag
1021 tatgatttgg ctaccaagag agtgcggcag cttctcgact tagaccctga agtggaatgt
1081 ctgaaggcca acaccaatga ggttctgtgg gcggtggtgg cggcgttcac caagtaactc
1141 tgctcggggt gaaccattct cctttctctc aagtaaacca gtagtttttc ttctgttgac
1201 ttctggtttt ctgtaatttg tactttccca cactataatt ggcttctgtt ttacaaaatg
1261 gtgggtggct ttttcttttt tgtacgtgta caggattctg ctggtacgag aggccttcct
1321 ctttctgttt ttaaaaaaag ttttactgcc atattggcat tccattccct gttgccatcc
1381 tcactgttac ctgttttggg tttctggtct actttgactt tcaaagtacc tccagcctcc
1441 tcatacgcac agcttttgga tgacctcagc ttgagtttct ccatatgtgc atgtacatct
1501 agcattctgc ctacagttca gacagaagtc acaaaaaggc cttcaactca ccaaaggtaa
1561 atatctgtat ctattaggac attttttaca tagacttcag ttgagatgta tacttagcaa
1621 aattattttt aaattgaaac agcacagtaa atacttaata taaaatgtcc cttggatttt
1681 gcttcccatg taaatctatt gtattattac acttgttata attttaacta taaaggtcca
1741 attgtttcac agagccagtt tgggatgggc tgcattccat ttatgctgta tatagtttga
1801 attatatata aattacccct tcttctggcc acccctgctc ccatcttagt attttgcaag
1861 atctaatcag ttgtacacct ggtgcccctc gcttgcttca atcatggtta tttgatggca
1921 aaatcgacct cttgtcgctg aaggagagag aaaagatgtg tgtctgattg gtcctgggat
1981 tttttgagct gtgccattta tggtactctt tgcctatgca tccccttttt agattttttt
2041 taaattttat cttactgttt ttataatttc tattgggaag aggcttgtga ccagtaccaa
2101 tcttgagttt ctttttctgt ccacaagtaa attaatatct gctctgaaat gtcatttatc
2161 tactcacaca ttcttgggga aaaaaatcaa atgtcagtcc tagcagatgt tgcatgtaaa
2221 ttggtagcaa gtaatgatta caacccagag gattaagaat tttgtaacag aaagctctat
2281 gttttaattt tttatataca attaggataa ttagcattgt cagactataa acctttgctt
2341 tttaaagttt atttttacta tttctttatc actttattgt atcatcacca ttggtttcat
2401 aatgtaaata ctatatgttg aacaaattaa atgtcaaaat tttttattac catagtccat
2461 gttaatagtg gggctttcag gtgtttagag attttttttg ttgttgttaa cattcattgc
2521 aaaagtacta gatggtgtat aactctagag ttgaatttta agggattccc taatatgtat
2581 actatctttt tatctgaagt aataaataaa caatgatctt gaaagtgcct gaaaaaaaaa
2641 aaaaaaaaaa aaaaa
//