LOCUS BC012113 1561 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homer homolog 3 (Drosophila), mRNA (cDNA clone
MGC:20122 IMAGE:4555641), complete cds.
ACCESSION BC012113
VERSION BC012113.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1561)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: d Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361156.
FEATURES Location/Qualifiers
source 1..1561
/db_xref="H-InvDB:HIT000035668"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20122 IMAGE:4555641"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1561
/gene="HOMER3"
/gene_synonym="HOMER-3"
/db_xref="GeneID:9454"
/db_xref="HGNC:HGNC:17514"
/db_xref="MIM:604800"
CDS 192..1277
/gene="HOMER3"
/gene_synonym="HOMER-3"
/codon_start=1
/product="homer homolog 3 (Drosophila)"
/protein_id="AAH12113.1"
/db_xref="GeneID:9454"
/db_xref="HGNC:HGNC:17514"
/db_xref="MIM:604800"
/translation="MSTAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDAT
RNVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLTQF
AEKFQEVKEAARLAREKSQDGGELTSPALGLASHQVPPSPLVSANGPGEEKLFRSQSA
DAPGPTERERLKKMLSEGSVGEVQWEAEFFALQDSNNKLAGALREANAAAAQWRQQLE
AQRAEAERLRQRVAELEAQAASEVTPTGEKEGLGQGQSLEQLEALVQTKDQEIQTLKS
QTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGR
AAQLLDVRLFELSELREGLARLAEAAP"
BASE COUNT 334 a 461 c 536 g 230 t
ORIGIN
1 gcggcgcgga gggcgcgggc ccgggagcca gggagcgagc ggggcgcccg gcagcgcgga
61 gtcagcgccg cgggggccgc acccgactcg cgcctggaca ctcgcggggc gccgacctgg
121 cagggggcca aaccagtgct cctgccacct ctctggctgc cccctagagc ctgcccatcc
181 cagcctgacc aatgtccaca gccagggagc agccaatctt cagcacacgg gcgcacgtgt
241 tccaaattga cccagccacc aagcgaaact ggatcccagc gggcaagcac gcactcactg
301 tctcctattt ctacgatgcc acccgcaatg tgtaccgcat catcagcatc ggaggcgcca
361 aggccatcat caacagcact gtcactccca acatgacctt caccaaaact tcccagaagt
421 tcgggcagtg ggccgacagt cgcgccaaca cagtctacgg cttgggcttt gcctctgaac
481 agcatctgac acagtttgcc gagaagttcc aggaagtgaa ggaagcagcc aggctggcca
541 gggagaaatc tcaggatggc ggggagctca ccagtccagc cctggggctc gcctcccacc
601 aggtgccccc gagccctctc gtcagtgcca acggccccgg cgaggaaaaa ctgttccgca
661 gccagagcgc tgatgccccc ggccccacag agcgcgagcg gctaaagaag atgttgtctg
721 agggctccgt gggcgaggta cagtgggagg ccgagttttt cgcactgcag gacagcaaca
781 acaagctggc aggcgccctg cgagaggcca acgccgccgc agcccagtgg aggcagcagc
841 tggaggctca gcgtgcagag gccgagcggc tgcggcagcg ggtggctgag ctggaggctc
901 aggcagcttc agaggtgacc cccaccggtg agaaggaggg gctgggccag ggccagtcgc
961 tggaacagct ggaagctctg gtgcaaacca aggaccagga gattcagacc ctgaagagtc
1021 agactggggg gccccgcgag gccctggagg ctgccgagcg tgaggagact cagcagaagg
1081 tgcaggacct ggagacccgc aatgcggagt tggagcacca gctgcgggcg atggagcgca
1141 gcctggagga ggcacgggca gagcgggagc gggcgcgggc tgaggtgggc cgggcagcgc
1201 agctgctgga cgtcaggctg tttgagctga gtgagctgcg tgagggcctg gcccgcctgg
1261 ctgaggctgc gccctgagcc ggggctggtt ttctatgaac gattccggcc tgggatgcgg
1321 gccaggctgc aggcggcata gttgggccca ttcgtcctgg aaagggactg gggggtccca
1381 acttagccct gggtgggccg ggccgggctg ggctggggtg ggccccagtc ggctctggtt
1441 gttggcagct ttggggctgt ttttgagctt ctcattgtgt agaatttcta gatcccccga
1501 ttacatttct aagcgtgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 a
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