LOCUS BC012107 1651 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH2 domain protein 2A, mRNA (cDNA clone MGC:20097
IMAGE:4636736), complete cds.
ACCESSION BC012107
VERSION BC012107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1651)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1651)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543620.
FEATURES Location/Qualifiers
source 1..1651
/db_xref="H-InvDB:HIT000035664"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20097 IMAGE:4636736"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1651
/gene="SH2D2A"
/gene_synonym="F2771"
/gene_synonym="TSAd"
/db_xref="GeneID:9047"
/db_xref="HGNC:HGNC:10821"
/db_xref="MIM:604514"
CDS 103..1272
/gene="SH2D2A"
/gene_synonym="F2771"
/gene_synonym="TSAd"
/codon_start=1
/product="SH2 domain protein 2A"
/protein_id="AAH12107.1"
/db_xref="GeneID:9047"
/db_xref="HGNC:HGNC:10821"
/db_xref="MIM:604514"
/translation="MEFPLAQICPQGSHEAPIPTFSTFQITDMTRRSCQNLGYTAASP
QAPEAASSTGNAERAEEVPGEGSLFLQAETRAWFQKTQAHWLLQHGAAPAWFHGFITR
REAERLLEPKPQGCYLVRFSESAVTFVLTYRSRTCCRHFLLAQLRDGRHVVLGEDSAH
ARLQDLLLHYTAHPLSPYGETLTEPLARQTPEPAGLSLRTEESNFGSKSQDPNPQYSP
IIKQGQAPVPMQKEGAGEKEPSQLLRPKPPIPAKPQLPPEVYTIPVPRHRPAPRPKPS
NPIYNEPDEPIAFYAMGRGSPGEAPSNIYVEVEDEGLPATLGHPVLRKSWSRPVPGGQ
NTGGSQLHSENSVIGQGPPLPHQPPPAWRHTLPHNLSRQVLQDRGQAWLPLGPPQ"
BASE COUNT 388 a 533 c 444 g 286 t
ORIGIN
1 cggggccagg gtgagaggag agatgatgag ttgctgagtg tgcacacctt tccggaacac
61 atacacacac cctgctctgg gatcccttgt gaggctgccc tcatggagtt ccccctggcc
121 cagatatgtc cccaagggag tcacgaagcc cccatcccaa ccttcagcac cttccagatc
181 acagacatga cccgcaggag ctgccagaac ctgggctaca ctgcggcatc tccccaggcc
241 ccggaggctg cctccagcac agggaatgct gagagggcag aggaggtgcc tggagaagga
301 agcctgttcc tgcaggccga gacccgggct tggttccaga agacccaggc ccactggctc
361 ctgcagcacg gggcagcccc tgcctggttc catggcttca tcacccggag ggaggcagag
421 aggctgctgg agcccaagcc tcaggggtgc tacttggtgc ggttcagcga gagcgcggtg
481 accttcgtgc tgacttacag gagccggact tgctgccgcc acttcctgct ggcccagctc
541 agggacgggc gccacgtggt gctgggcgag gacagcgccc acgcgcggct gcaggacctg
601 ctgctgcact acaccgcgca cccgctcagc ccctacgggg agacgctcac cgagcccctc
661 gcccgacaga ctcctgagcc tgcaggactt tccctgagga ccgaagaatc aaactttgga
721 agcaaaagcc aggacccaaa cccccagtac agcccaatca tcaaacaggg gcaagcccca
781 gtcccgatgc agaaagaggg ggccggggag aaggagccct cccagctgct caggcccaag
841 cctcccatcc ccgccaaacc tcagctgccc ccagaagtct acacaatccc tgttccacga
901 caccgcccgg ccccacgccc caagccctcc aatcctatct acaatgagcc tgatgaaccc
961 atagctttct atgccatggg ccggggcagc cctggggaag cccccagcaa catctatgtg
1021 gaagtggaag atgagggcct acccgccacc cttgggcacc ctgtcctacg gaagagctgg
1081 tccaggcctg tcccaggagg ccagaataca ggtggctccc agctgcattc tgagaactct
1141 gtgattgggc aaggccctcc cctgccccac cagcccccac ccgcctggag acacaccctc
1201 ccccacaatc tttctagaca ggtgcttcag gacagaggac aggcatggct tccccttggg
1261 cctcctcagt aggcggtctg gcctgacccc caacaaagaa gcctggaggt cagagaagca
1321 aatgcggagc ctgctccctc ctaagaagat cccaagaatc caatggctca gtccttggtg
1381 atctaagaca gcaaagaagt gtgcaaggag ggccctgtta gctcccactg tcctggtttc
1441 tcctcctgga gtctaatttc cttggccctc tgagcctttt gagtctgggc cctggtccaa
1501 tgctgctgtt gtctgaggaa tggtttggtg agaacagatg ttagaacttg tttgttgatt
1561 cttgtctggc taataaatca tcaccaactg ccttctccta cagggaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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