LOCUS BC012103 1941 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-phosphoinositide dependent protein kinase-1, mRNA
(cDNA clone MGC:20087 IMAGE:4561371), complete cds.
ACCESSION BC012103
VERSION BC012103.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60498971.
FEATURES Location/Qualifiers
source 1..1941
/db_xref="H-InvDB:HIT000035660"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20087 IMAGE:4561371"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1941
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
CDS 110..1780
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/codon_start=1
/product="3-phosphoinositide dependent protein kinase-1"
/protein_id="AAH12103.1"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
/translation="MARTTSQLYDAVPIQSSVVLCSCPSPSMVRTQTESSTPPGIPGG
SRQGPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLAREL
ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS
YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH
IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV
AGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG
PLKAHPFFESVTWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGCMQVSSSS
SSHSLSASDTGLPQRSGSNIEQYIHDLDSNSFELDLQFSEDEKRLLLEKQAGGNPWHQ
FVENNLILKMGPVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEA
KNFKTFFVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAVQ"
BASE COUNT 500 a 514 c 516 g 411 t
ORIGIN
1 gcaggatgag ggcggccatt gctggggctc cgcttcgggg aggaggacgc tgaggaggcg
61 ccgagccgcg cagcgctgcg ggggaggcgc ccgcgccgac gcggggccca tggccaggac
121 caccagccag ctgtatgacg ccgtgcccat ccagtccagc gtggtgttat gttcctgccc
181 atccccatca atggtgagga cccagactga gtccagcacg ccccctggca ttcctggtgg
241 cagcaggcag ggccccgcca tggacggcac tgcagccgag cctcggcccg gcgccggctc
301 cctgcagcat gcccagcctc cgccgcagcc tcggaagaag cggcctgagg acttcaagtt
361 tgggaaaatc cttggggaag gctctttttc cacggttgtc ctggctcgag aactggcaac
421 ctccagagaa tatgcgatta aaattctgga gaagcgacat atcataaaag agaacaaggt
481 cccctatgta accagagagc gggatgtcat gtcgcgcctg gatcacccct tctttgttaa
541 gctttacttc acatttcagg acgacgagaa gctgtatttc ggccttagtt atgccaaaaa
601 tggagaacta cttaaatata ttcgcaaaat cggttcattc gatgagacct gtacccgatt
661 ttacacggct gagattgtgt ctgctttaga gtacttgcac ggcaagggca tcattcacag
721 ggaccttaaa ccggaaaaca ttttgttaaa tgaagatatg cacatccaga tcacagattt
781 tggaacagca aaagtcttat ccccagagag caaacaagcc agggccaact cattcgtggg
841 aacagcgcag tacgtttctc cagagctgct cacggagaag tccgcctgta agagttcaga
901 cctttgggct cttggatgca taatatacca gcttgtggca ggactcccac cattccgagc
961 tggaaacgag tatcttatat ttcagaagat cattaagttg gaatatgact ttccagaaaa
1021 attcttccct aaggcaagag acctcgtgga gaaacttttg gttttagatg ccacaaagcg
1081 gttaggctgt gaggaaatgg aaggatacgg acctcttaaa gcacacccgt tcttcgagtc
1141 cgtcacgtgg gagaacctgc accagcagac gcctccgaag ctcaccgctt acctgccggc
1201 tatgtcggaa gacgacgagg actgctatgg caattatgac aatctcctga gccagtttgg
1261 ctgcatgcag gtgtcttcgt cctcctcctc acactccctg tcagcctccg acacgggcct
1321 gccccagagg tcaggcagca acatagagca gtacattcac gatctggact cgaactcctt
1381 tgaactggac ttacagtttt ccgaagatga gaagaggttg ttgttggaga agcaggctgg
1441 cggaaaccct tggcaccagt ttgtagaaaa taatttaata ctaaagatgg gcccagtgga
1501 taagcggaag ggtttatttg caagacgacg acagctgttg ctcacagaag gaccacattt
1561 atattatgtg gatcctgtca acaaagttct gaaaggtgaa attccttggt cacaagaact
1621 tcgaccagag gccaagaatt ttaaaacttt ctttgtccac acgcctaaca ggacgtatta
1681 tctgatggac cccagcggga acgcacacaa gtggtgcagg aagatccagg aggtttggag
1741 gcagcgatac cagagccacc cggacgccgc tgtgcagtga cgtggcctgc ggccgggctg
1801 cccttcgctg ccaggacacc tgccccagcg cggcttggcc gccatccggg acgcttccag
1861 accacctgcc agccatcaca aggggaacgc agaggcggaa accttgcagc atttttattt
1921 aaaaaaaaaa aaaaaaaaaa a
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