LOCUS BC012077 3496 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens ring finger protein 31, mRNA (cDNA clone MGC:19975
IMAGE:4653017), complete cds.
ACCESSION BC012077
VERSION BC012077.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3496)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3496)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38045939.
FEATURES Location/Qualifiers
source 1..3496
/db_xref="H-InvDB:HIT000035639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19975 IMAGE:4653017"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3496
/gene="RNF31"
/gene_synonym="FLJ10111"
/gene_synonym="FLJ23501"
/gene_synonym="MGC19975"
/gene_synonym="ZIBRA"
/db_xref="GeneID:55072"
/db_xref="HGNC:HGNC:16031"
CDS 170..3388
/gene="RNF31"
/gene_synonym="FLJ10111"
/gene_synonym="FLJ23501"
/gene_synonym="MGC19975"
/gene_synonym="ZIBRA"
/codon_start=1
/product="ring finger protein 31"
/protein_id="AAH12077.1"
/db_xref="GeneID:55072"
/db_xref="HGNC:HGNC:16031"
/translation="MPGEEEERAFLVAREELASALRRDSGQAFSLEQLRPLLASSLPL
AARYLQLDAARLVRCNAHGEPRNYLNTLSTALNILEKYGRNLLSPQRPRYWRGVKFNN
PVFRSTVDAVQGGRDVLRLYGYTEEQPDGLSFPEGQEEPDEHQVATVTLEVLLLRTEL
SLLLQNTHPRQQALEQLLEDKVEDDMLQLSEFDPLLREIAPGPLTTPSVPGSTPGPCF
LCGSAPGTLHCPSCKQALCPACDHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQ
PRPQSTSLLALGDSSLSSPNPASAHLPWHCAACAMLNEPWAVLCVACDRPRGCKGLGL
GTEGPQGTGGLEPDLARGRWACQSCTFENEAAAVLCSICERPRLAQPPSLVVDSRDAG
ICLQPLQQGDALLASAQSQVWYCIHCTFCNSSPGWVCVMCNRTSSPIPAQHAPRPYAS
SLEKGPPKPGPPRRLSAPLPSSCGDPEKQRQDKMREEGLQLVSMIREGEAAGACPEEI
FSALQYSGTEVPLQWLRSELPYVLEMVAELAGQQDPGLGAFSCQEARRAWLDRHGNLD
EAVEECVRTRRRKVQELQSLGFGPEEGSLQALFQHGGDVSRALTELQRQRLEPFRQRL
WDSGPEPTPSWDGPDKQSLVRRLLAVYALPSWGRAELALSLLQETPRNYELGDVVEAV
RHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHIT
DMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLW
CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQ
AQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEP
NCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVI
EQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETAT
ERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK"
BASE COUNT 691 a 1065 c 1056 g 684 t
ORIGIN
1 ctgggccggg ggctggagag tgaccgtggt ctgagtgacc tggggcggct gcgtgggccg
61 gggtgggcct caaagccggg caccagacgg gaggggcggc gctcgggccg cgcgctgccc
121 gcgccgggtc ctggcgggcg gcgaggctgg ggctgactcc tgcctcagga tgccggggga
181 ggaagaggag cgggccttcc tggtggcccg cgaggagctg gcgagcgccc tgaggaggga
241 ttccgggcag gcgttttccc tggagcagct ccggccgcta ctagccagct ctctgccgct
301 agccgcccgc tacctgcagc tggacgccgc acgccttgtc cgctgcaacg ctcatgggga
361 gccccgaaac tacctcaaca ccctgtccac ggctctgaac atcctggaga aatacggccg
421 caaccttctc agccctcagc ggcctcggta ctggcgtggt gtcaagttta ataaccctgt
481 ctttcgcagc acggtggatg ctgtgcaggg gggccgagat gtgctgcgat tatatggcta
541 cacagaggag caaccagatg ggttgagctt ccccgaaggg caggaggagc cagatgagca
601 ccaggttgct acagtcacac tggaagtact gctgcttcgg acagagctca gcctgctatt
661 gcagaatact catccaagac agcaggcact ggagcagctg ttggaagaca aggttgaaga
721 tgatatgctg cagctttcag aatttgaccc cctattgaga gagattgctc ctggccccct
781 caccacaccc tctgtcccag gctccactcc tggtccctgc ttcctctgtg gttctgcccc
841 aggcacactg cactgcccat cctgtaaaca ggccctgtgt ccagcctgtg accacctgtt
901 ccatggacac ccatcccgtg ctcatcacct ccgccagacc ctgcctgggg tcctgcaggg
961 tacccacctg agccccagtt tacctgcctc agcccaacca cggccccagt cgacctccct
1021 gctggccctg ggagacagct ctctttcttc ccctaatcct gcaagtgctc atttgccctg
1081 gcactgtgct gcctgtgcca tgctaaatga gccttgggca gtgctctgtg tggcctgtga
1141 tcggccccga ggctgtaagg ggttggggtt gggaactgag ggtccccaag gaactggagg
1201 cctagaacct gatcttgcac ggggtcggtg ggcctgccag agctgtacct ttgagaatga
1261 ggcagctgct gtgctatgtt ccatatgtga gcgacctcgg ctggcccagc ctcccagctt
1321 ggtggtggat tcccgagatg ctggcatttg cctgcaaccc cttcagcagg gggatgcttt
1381 gctggcctct gcccagagtc aagtctggta ctgtattcac tgtaccttct gcaactcgag
1441 ccctggctgg gtgtgtgtta tgtgcaaccg gactagtagc cccattccag cacaacatgc
1501 cccccggccc tatgccagct ctttggaaaa gggacccccc aagcctgggc ccccacgacg
1561 ccttagtgcc cccctgccca gttcctgtgg agatcctgag aagcagcgcc aagacaagat
1621 gcgggaagaa ggcctccagc tagtgagcat gatccgggaa ggggaagccg caggtgcctg
1681 tccagaggag atcttctcgg ctctgcagta ctcgggcact gaggtgcctc tgcagtggtt
1741 gcgctcagaa ctgccctacg tcctggagat ggtggctgag ctggctggac agcaggaccc
1801 tgggctgggt gccttttcct gtcaggaggc ccggagagcc tggctggatc gtcatggcaa
1861 ccttgatgaa gctgtggagg agtgtgtgag gaccaggcga aggaaggtgc aggagctcca
1921 gtctctaggc tttgggcctg aggaggggtc tctccaggca ttgttccagc acggaggtga
1981 tgtgtcacgg gccctgactg agctacagcg ccaacgccta gagcccttcc gccagcgcct
2041 ctgggacagt ggccctgagc ccaccccttc ctgggatggg ccagacaagc agagcctggt
2101 caggcggctt ttggcagtct acgcactccc cagctggggc cgggcagagc tggcactgtc
2161 actgctgcag gagacaccca ggaactatga gttgggggat gtggtagaag ctgtgaggca
2221 cagccaggac cgggccttcc tgcgccgctt gcttgcccag gagtgtgccg tgtgtggctg
2281 ggccctgccc cacaaccgga tgcaggccct gacttcctgt gagtgcacca tctgtcctga
2341 ctgcttccgc cagcacttca ccatcgcctt gaaggagaag cacatcacag acatggtgtg
2401 ccctgcctgt ggccgccccg acctcaccga tgacacacag ttgctcagct acttctctac
2461 ccttgacatc cagcttcgcg agagcctaga gccagatgcc tatgcgttgt tccataagaa
2521 gctgaccgag ggtgtgctga tgcgggaccc caagttcttg tggtgtgccc agtgctcctt
2581 tggcttcata tatgagcgtg agcagctgga ggcaacttgt ccccagtgtc accagacctt
2641 ctgtgtgcgc tgcaagcgcc agtgggagga gcagcaccga ggtcggagct gtgaggactt
2701 ccagaactgg aaacgcatga acgacccaga ataccaggcc cagggcctag caatgtatct
2761 tcaggaaaac ggcattgact gccccaaatg caagttctcg tacgccctgg cccgaggagg
2821 ctgcatgcac tttcactgta cccagtgccg ccaccagttc tgcagcggct gctacaatgc
2881 cttttacgcc aagaataaat gtccagagcc taactgcagg gtgaaaaagt ccctgcacgg
2941 ccaccaccct cgagactgcc tcttctacct gcgggactgg actgctctcc ggcttcagaa
3001 gctgctacag gacaataacg tcatgtttaa tacagagcct ccagctgggg cccgggcagt
3061 ccctggaggc ggctgccgag tgatagagca gaaggaggtt cccaatgggc tcagggacga
3121 agcttgtggc aaggaaactc cagctggcta tgccggcctg tgccaggcac actacaaaga
3181 gtatcttgtg agcctcatca atgcccactc gctggaccca gccaccttgt atgaggtgga
3241 agagctggag acggccactg agcgctacct gcacgtacgc ccccagcctt tggctggaga
3301 ggatccccct gcttaccagg cccgcttgtt acagaagctg acagaagagg tacccttggg
3361 acagagtatc ccccgcaggc ggaagtagct gagggcaagg gtcccgatga gggtcccatg
3421 gcctgctccc tcaggaacag ctccagcacc aataaagagg catcttacca ccaaaaaaaa
3481 aaaaaaaaaa aaaaaa
//