LOCUS BC012057 1346 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens toll interacting protein, mRNA (cDNA clone MGC:19882
IMAGE:4647828), complete cds.
ACCESSION BC012057
VERSION BC012057.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361618.
FEATURES Location/Qualifiers
source 1..1346
/db_xref="H-InvDB:HIT000035624"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19882 IMAGE:4647828"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1346
/gene="TOLLIP"
/gene_synonym="IL-1RAcPIP"
/db_xref="GeneID:54472"
/db_xref="HGNC:HGNC:16476"
/db_xref="MIM:606277"
CDS 90..914
/gene="TOLLIP"
/gene_synonym="IL-1RAcPIP"
/codon_start=1
/product="toll interacting protein"
/protein_id="AAH12057.1"
/db_xref="GeneID:54472"
/db_xref="HGNC:HGNC:16476"
/db_xref="MIM:606277"
/translation="MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQ
YGGAVGTVGRLNITVVQAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNK
VIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGD
DKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVAL
PPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP"
BASE COUNT 256 a 432 c 414 g 244 t
ORIGIN
1 tgtctccgtc gcaggctccg gcgggggcgc aggaggtcgc ccggcgcgtc actgtcgggt
61 cggcgagcca cgggggccgc cgcagcacca tggcgaccac cgtcagcact cagcgcgggc
121 cggtgtacat cggtgagctc ccgcaggact tcctccgcat cacgcccaca cagcagcagc
181 ggcaggtcca gctggacgcc caggcggccc agcagctgca gtacggaggc gcagtgggca
241 ccgtgggccg actgaacatc acggtggtac aggcaaagtt ggccaagaat tacggcatga
301 cccgcatgga cccctactgc cgactgcgcc tgggctacgc ggtgtacgag acgcccacgg
361 cacacaatgg cgccaagaat ccccgctgga ataaggtcat ccactgcacg gtgcccccag
421 gcgtggactc tttctatctc gagatcttcg atgagagagc cttctccatg gacgaccgca
481 ttgcctggac ccacatcacc atcccggagt ccctgaggca gggcaaggtg gaggacaagt
541 ggtacagcct gagcgggagg cagggggacg acaaggaggg catgatcaac ctcgtcatgt
601 cctacgcgct gcttccagct gccatggtga tgccacccca gcccgtggtc ctgatgccaa
661 cagtgtacca gcagggcgtt ggctatgtgc ccatcacagg gatgcccgct gtctgtagcc
721 ccggcatggt gcccgtggcc ctgcccccgg ccgccgtgaa cgcccagccc cgctgtagcg
781 aggaggacct gaaagccatc caggacatgt tccccaacat ggaccaggag gtgatccgct
841 ccgtgctgga agcccagcga gggaacaagg atgccgccat caactccctg ctgcagatgg
901 gggaggagcc atagagcctc tgcctcgatg ccgttttgcc cccgctcttt ggacacgccg
961 acccggcgct ccccaaggaa tgctgtccca acaagattcc cgtgaaagag cacccgtgtc
1021 gccccctccc gtggacttct gtgccgcccc gtccacacct gttcttgggt gcatgtgggt
1081 tttcggttcc tggcggtcca ggacggggcg ggggctcccc tcccatctcg tgctgggagg
1141 tctcagcgcg ctctcctgtc cctgggacgt gcgtctctcc ttctcatgcc gttctggaaa
1201 atgctcttgc tgtagagagc agctgcttct gccagggtgt tggaggtggt ggagcgcctt
1261 ccgattccat tcatggcatt ttgtgatgtg atgtaattgg aatagagctg ttgatttaag
1321 gcacacacaa aaaaaaaaaa aaaaaa
//