LOCUS BC012055 1316 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aryl hydrocarbon receptor interacting protein-like 1,
mRNA (cDNA clone MGC:19873 IMAGE:4634156), complete cds.
ACCESSION BC012055
VERSION BC012055.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1316)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21626460.
FEATURES Location/Qualifiers
source 1..1316
/db_xref="H-InvDB:HIT000035622"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19873 IMAGE:4634156"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1316
/gene="AIPL1"
/gene_synonym="AIPL2"
/db_xref="GeneID:23746"
/db_xref="HGNC:HGNC:359"
/db_xref="MIM:604392"
CDS 9..1163
/gene="AIPL1"
/gene_synonym="AIPL2"
/codon_start=1
/product="aryl hydrocarbon receptor interacting
protein-like 1"
/protein_id="AAH12055.1"
/db_xref="GeneID:23746"
/db_xref="HGNC:HGNC:359"
/db_xref="MIM:604392"
/translation="MDAALLLNVEGVKKTILHGGTGELPNFITGSRVIFHFRTMKCDE
ERTVIDDSRQVGQPMHIIIGNMFKLEVWEILLTSMRVHEVAEFWCDTIHTGVYPILSR
SLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQPLVFVIELLQVDAPS
DYQRETWNLSNHEKMKAVPVLHGEGNRLFKLGRYEEASSKYQEAIICLRNLQTKEKPW
EVQWLKLEKMINTLILNYCQCLLKKEEYYEVLEHTSDILRHHPGIVKAYYVRARAHAE
VWNEAEAKADLQKVLELEPSMQKAVRRELRLLENRMAEKQEEERLRCRNMLSQGATQP
PAEPPTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQH"
BASE COUNT 321 a 383 c 396 g 216 t
ORIGIN
1 ctgcagccat ggatgccgct ctgctcctga acgtggaagg ggtcaagaaa accattctgc
61 acgggggcac gggcgagctc ccaaacttca tcaccggatc ccgagtgatc tttcatttcc
121 gcaccatgaa atgtgatgag gagcggacag tcattgacga cagtcggcag gtgggccagc
181 ccatgcacat catcatcgga aacatgttca agctcgaggt ctgggagatc ctgcttacct
241 ccatgcgggt gcacgaggtg gccgagttct ggtgcgacac catccacacg ggggtctacc
301 ccatcctgtc ccggagcctg aggcagatgg cccagggcaa ggaccccaca gagtggcacg
361 tgcacacgtg cgggctggcc aacatgttcg cctaccacac gctgggctac gaggacctgg
421 acgagctgca gaaggagcct cagcctctgg tctttgtgat cgagctgctg caggttgatg
481 ccccgagtga ttaccagagg gagacctgga acctgagcaa tcatgagaag atgaaggcgg
541 tgcccgtcct ccacggagag ggaaatcggc tcttcaagct gggccgctac gaggaggcct
601 cttccaagta ccaggaggcc atcatctgcc taaggaacct gcagaccaag gagaagccgt
661 gggaggtgca gtggctgaag ctggagaaga tgatcaatac tctgatcctc aactactgcc
721 agtgcctgct gaagaaggag gagtactatg aggtgctgga gcacaccagt gatattctcc
781 ggcaccaccc aggcatcgtg aaggcctact acgtgcgtgc ccgggctcac gcagaggtgt
841 ggaatgaggc cgaggccaag gcggacctcc agaaagtgct ggagctggag ccgtccatgc
901 agaaggcggt gcgcagggag ctgaggctgc tggagaaccg catggcggag aagcaggagg
961 aggagcggct gcgctgccgg aacatgctga gccagggtgc cacgcagcct cccgcagagc
1021 cacccacaga gccacccgca cagtcatcca cagagccacc tgcagagcca cccacagcac
1081 catctgcaga gctgtccgca gggccccctg cagagccagc cacagagcca cccccgtccc
1141 cagggcactc gctgcagcac tgagccccct gaggcccaca gccacccagg cagggagcaa
1201 gtggcctggt cacttctggt tcgattgacc aggatcgtgg tgtcactttt taaaatttaa
1261 aattaatttt tgaaatcaaa gtcagacaca cccatggtaa aaaaaaaaaa aaaaaa
//