LOCUS BC012044 1320 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens small glutamine-rich tetratricopeptide repeat
(TPR)-containing, beta, mRNA (cDNA clone MGC:10496 IMAGE:3625993),
complete cds.
ACCESSION BC012044
VERSION BC012044.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1320)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1320)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: i Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308140.
FEATURES Location/Qualifiers
source 1..1320
/db_xref="H-InvDB:HIT000035616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10496 IMAGE:3625993"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1320
/gene="SGTB"
/gene_synonym="FLJ39002"
/gene_synonym="SGT2"
/db_xref="GeneID:54557"
/db_xref="HGNC:HGNC:23567"
CDS 198..1112
/gene="SGTB"
/gene_synonym="FLJ39002"
/gene_synonym="SGT2"
/codon_start=1
/product="small glutamine-rich tetratricopeptide repeat
(TPR)-containing, beta"
/protein_id="AAH12044.1"
/db_xref="GeneID:54557"
/db_xref="HGNC:HGNC:23567"
/translation="MSSIKHLVYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFK
ISPEDTHLAVSQPLTEMFTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMKEENYA
AAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMG
LALTALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTGLSFDMASL
INNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQI
QQQNPELIEQLRNHIRSRSFSSSAEEHS"
BASE COUNT 419 a 283 c 311 g 307 t
ORIGIN
1 gagagcacag cctggtgggt tctggggtct acggcctagg ggccggggaa gtttgcgccg
61 ccgcgaccag tgctgcgatc ccgagccggg ctccagcccc gaggaccagg ggtcgggcgg
121 gcctgcctac ggaaccccgc gggccagcag cagtcgtctc gcgtcctcct gcttggaaaa
181 gtgtttaagc ttctaaaatg tcatctatca agcacctggt ttatgcagtt attcgtttct
241 tacgggaaca aagtcagatg gacacttaca cctcggatga acaagaaagt ttggaagttg
301 caattcagtg cttggagaca gtttttaaga tcagcccaga agatacacac ctagcagttt
361 cacagccttt gacagaaatg tttaccagtt ccttctgtaa gaatgacgtt ctgccccttt
421 caaactcagt gcctgaagat gtgggaaaag ctgaccaatt aaaagatgaa ggcaataacc
481 acatgaaaga agaaaattat gctgctgcag tggattgtta cacacaggca atagaattgg
541 atcccaataa tgcagtttac tattgcaaca gggctgctgc tcagagcaaa ttaggtcact
601 acacagatgc gataaaggat tgtgaaaaag caatagcaat tgattcaaag tacagcaagg
661 cctatgggag aatggggctg gccctcactg ccttgaataa atttgaagaa gcagttacaa
721 gttatcaaaa ggcattagat cttgaccctg aaaatgattc ctataagtca aatctgaaaa
781 tagcagaaca gaagttaaga gaggtatcca gtcctacagg aactggactg agctttgaca
841 tggctagctt gataaataat ccagccttca ttagtatggc ggcaagttta atgcagaacc
901 ctcaagttca acagctaatg tcaggaatga tgacaaatgc cattggggga cctgctgctg
961 gagttggggg cctaactgac ctgtcaagcc tcatccaagc gggacagcag tttgctcagc
1021 agatacagca acaaaatcct gaacttatag agcaactgag aaatcacatc cggagcagat
1081 cattcagcag cagcgctgaa gagcattcct gatttaacca ggggctcaag cccaagatac
1141 aaatggttta tggctatgaa tgaagtattt gttgtagata gtaccccctc cctccttcaa
1201 aaaaccaaac accatatctg atgtgtgaaa ataatggagg aaaacctctt gtgtatattc
1261 ttaaagaata aatctgttta gacagtaggt ttatcacaaa caaaaaaaaa aaaaaaaaaa
//