LOCUS BC012029 1500 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens shisa homolog 3 (Xenopus laevis), mRNA (cDNA clone
IMAGE:4477067), partial cds.
ACCESSION BC012029
VERSION BC012029.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: d Column: 12.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000087769"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4477067"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1500
/gene="SHISA3"
/gene_synonym="hShisa3"
/db_xref="GeneID:152573"
/db_xref="HGNC:HGNC:25159"
CDS <1..435
/gene="SHISA3"
/gene_synonym="hShisa3"
/codon_start=1
/product="SHISA3 protein"
/protein_id="AAH12029.1"
/db_xref="GeneID:152573"
/db_xref="HGNC:HGNC:25159"
/translation="GYVPFLIVGSIFIAFIILGSVVAIYCCTCLRPKEPSQQPIRFSL
RSYQTETLPMILTSTSPRAPSRQSSTATSSSSTGGSIRRFSFARAEPGCLVPSPPPPY
TTSHSIHLAQPSGFLVSPQYFAYPLQQEPPLPGKSCPDFSSS"
BASE COUNT 455 a 330 c 263 g 452 t
ORIGIN
1 ggctacgtcc cctttctcat cgtcggctcc atcttcattg cgttcatcat cctgggctct
61 gtagtggcta tttattgttg cacctgtttg agacccaagg agccctcgca gcagccaatc
121 cgcttctcac tccgcagcta tcagacagag accctgccca tgatcctgac ctccaccagc
181 cccagggcac cctcccggca gtccagcaca gccacgagct ccagctccac aggcggctcc
241 atccgcaggt tctcctttgc cagggctgag ccgggctgcc tggtgccctc accgcccccg
301 ccatacacca ccagccactc aatccacctg gctcagccat ctggtttcct ggtgtcaccc
361 cagtatttcg cttaccccct ccagcaggag cccccactgc ctgggaagag ctgtccagac
421 ttcagttcca gttgacacgc ccaggccatg aatccacaac tcagtcagat ggcagacagg
481 tggagccctg ctcccattgc cacatgcaat tctgagaaaa tttcccttgt aactgatcag
541 tgtcatggag gagcatgcta ggaaaacaca gcaccttcta atttgaaagt tcctgtctcc
601 aatcacagaa aggctaaacc agagaactgt tttctggttt tgcaaacatg tgatcattac
661 atttcaatct atgctacttt tattcaaaat atgcagcagt ttgactttaa agttgcaaac
721 tggctaaaaa cgttttactg gacattcagc tatattgctt agaaaagggc tacatgtttc
781 tttttcatat aagttgttca ttgagttatg ataggaatat attcataaat aagcaaagaa
841 aaatacctaa ttgtaattat caaaggttca cttaaaaaaa ttaactatta ggtaaactta
901 agggggcagt gaaaaatcta tttatgattt cgggagtaac ctaaccatga ataatattag
961 cataatgaga acatttactt tttaaataaa taactaaatt ttgtttacaa tatgagtttt
1021 tccagaatac aaggtttcaa taatcacatg aggagtttaa agttttaaat atatactcag
1081 acattcattg taacacagag tgtatgtaaa atcatttccc ccactcactg gagggagtat
1141 ttattgcaga ctttttgttc agcaacattt agtgtttcag tgaaagttgg acagttgggg
1201 cttaaaacat ttatttgtaa aatgagctat gttcaaatgt aaatatttgt aatttaatgt
1261 atttaccaca ttgactgtac taattattta gtagtcatac tgtaattttt atgttaataa
1321 taactggagt tcaaagtcta gctattggta taatcatcta atattatata tatctccagt
1381 gcccctgaat tttatgtttg atgactatat atttgggcat atatcttgtt ggattagaat
1441 aaataaaaca ctttatattt tcatgaactc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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