LOCUS BC011962 1841 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens SH3-binding domain protein 5-like, mRNA (cDNA clone
IMAGE:3863062), partial cds.
ACCESSION BC011962
VERSION BC011962.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: h Column: 11.
FEATURES Location/Qualifiers
source 1..1841
/db_xref="H-InvDB:HIT000087746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3863062"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1841
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/db_xref="GeneID:80851"
CDS <1..373
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/codon_start=2
/product="SH3BP5L protein"
/protein_id="AAH11962.1"
/db_xref="GeneID:80851"
/translation="IHARRRGGLPPHPLGPRRSSPVGAEAGPEDMEDGDSGIEGAEGA
GLEEGSSLGPGPAPDTDTLSLLSLRTVASDLQKCDSVEHLRGLSDHVSLDGQELGTRS
GGRRGSDGGARGGRHQRSVSL"
BASE COUNT 325 a 550 c 559 g 407 t
ORIGIN
1 gattcacgca cggcgccgcg ggggtctgcc tccccacccc ctgggccctc ggcgctcctc
61 ccccgtgggg gccgaggcag gacccgagga catggaggac ggagacagcg ggattgaggg
121 ggccgagggt gcggggctgg aggagggcag cagcctgggg cccggccccg cccccgacac
181 cgataccctg agtctgctga gcctgcgcac ggtggcttca gacctgcaga agtgcgactc
241 cgtggagcac ttgcgaggcc tctcggacca cgtcagtctg gacggccaag agctgggaac
301 gcggagtgga gggcgccggg gcagcgacgg cggagcccgt gggggtcggc accagcgcag
361 cgtcagcctg tagccgaggg gccagggttc ctggcttgaa tctgccacca cgggccggtt
421 ggggcccaca gtcttctcac gccctctcct ctggggcctc gtcttcccga aggtcccctt
481 ctccagtgct tccctgggag aggccagctg tgttcgagtc ctctgtgcct gccctggcgt
541 tctcacagcc tcccccttcc cctcagcagg cggctctctt tgccttaccc attcagaagg
601 ctcgccctcg gcgctctgtc tgcctctgcc tgccagctca tcacgatctg cagggcattg
661 accctttgct ttccctttct gctccctctc tttccatctg tttggctttt tccctcaggg
721 aacttggtct agaaggcact gggaagctca tcagagaaaa tgggtgctgg gcctgagtac
781 tcccgtcgga ggggatggac agtcacccct cccgttggtt tccagccccg ccccccttcc
841 caaggcaact ctggagggta ccctaggtat gctgctgagc cctgcccccc gtcctgctcc
901 agcctgcccg tgtgtaacct gtaagatgta ctgtgtgcct ccggaagaca ccacctttcc
961 cttcagcatt ccctttcatg acctgaggca ctctgcgatg tgtgccccaa agcagaactt
1021 acagggcctg caggaagctg gtgtcaggga gagaaaccca accccactgt caacataggg
1081 agcatcacca actccagact ggctcctgtg ggtatggtgt ttccgctggg ctgggtcctc
1141 aacattgcca aggtgctagt gggtccctaa gagggcccat gttgggggtg aagtcatgag
1201 gtcctgaagg cttaggcccc tgtcattccc accctcactc ttgctgcaca gttgtgttta
1261 ctttttctgg gtagaggatg ctgaactgac tcagcaccct cctgcaggac ggggttaggg
1321 aatttggtgc tcaattgctc tcccttgctc ttccccaaac tgaaaatacc tactgcagga
1381 tccctcgggg cacactgaag cttggctgcc aaccctctta tttcctttgt tacagggagg
1441 ggttggcttg gggtgaaaag ttctgccctc cgcagggagc agctccagct gcctggcagt
1501 gctcccagtt tgtagggaag ccacaccaga tctgggtgcc ttgggagaac cagtccttcc
1561 ttttgaccca ccccaggaag atggagtgct cttttctagg cccatgttct gccagcaacc
1621 gggatgcgtg ggcaactgga ctctgcacgg gggtctacag gttgagggag gttggtcaca
1681 atgagaacct cggggtttga ggtggccatg ggcagacagc cgaaagggag ggagggtgtg
1741 ggtgtgcgtg tgtgcatgtg ctggtgtgta agggggaaag ggtctttcct ggttttattt
1801 aaataaagta gtttatgtaa cagttaaaaa aaaaaaaaaa a
//