LOCUS BC011920 2604 bp mRNA linear HUM 01-JUN-2004
DEFINITION Homo sapiens Rho GTPase activating protein 10, mRNA (cDNA clone
IMAGE:4310652), partial cds.
ACCESSION BC011920
VERSION BC011920.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2604)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011920.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Linehan
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2604
/db_xref="H-InvDB:HIT000087732"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4310652"
/tissue_type="Kidney, renal carcinoma (ascites)"
/clone_lib="NIH_MGC_45"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2604
/gene="ARHGAP10"
/gene_synonym="FLJ20896"
/gene_synonym="FLJ41791"
/gene_synonym="GRAF2"
/db_xref="GeneID:79658"
CDS <1..1891
/gene="ARHGAP10"
/gene_synonym="FLJ20896"
/gene_synonym="FLJ41791"
/gene_synonym="GRAF2"
/codon_start=2
/product="ARHGAP10 protein"
/protein_id="AAH11920.2"
/db_xref="GeneID:79658"
/translation="SHLQEADIQVEQNRQHFYELSLEYVCKLQEIQERKKFEFVEPML
SFFQGMFTFYHQGHELAKDFNHYKMELQINIQNTRNRFEGTRSEVEELMNKIRQNPKD
HKRASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKAAKKFNMIPFEHRSGGKLGDGE
VFFLKECTKRHTDSIDRRFCFDIEAADRPGVSLTMQAFSEEERKQWLEALGGKEALSH
SFNTAIIPRPEGNAQLDKMGFTIIRKCISAVETRGINDQGLYRVVGVSSKVQRLLSML
MDVKTCNEVDLENSADWEVKTITSALKQYLRSLPEPLMTYELHGDFIVPAKSGSPESR
VNAIHFLVHKLPEKNKEMLDILVKHLTNVSNHSKQNLMTVANLGVVFGPTLMRPQEET
VAALMDLKFQNIVVEILIENHEKIFRTPPDTTFPEPTCLSASPPNAPPRQSKRQGQRT
KRPVAVYNLCLELEDGDNPYPSKEDTPTSSLDSLSSPSPVTTAVPGPPGPDKNHLLAD
GGSFGDWASTIPGQTRSSMVQWLNPQSPTTTSSNSAVTPLSPGSSPFPFSPPATVADK
PPESIRSRKARAVYPCEAEHSSELSFEIGAIFEDVQTSREPGWLEGTLNGKRGLIPQN
YVKLL"
BASE COUNT 717 a 631 c 654 g 602 t
ORIGIN
1 ctcacattta caagaggcag atatccaagt agagcagaac cggcaacact tctatgaact
61 gtctctcgag tatgtgtgta agctgcagga aatccaagaa agaaagaagt ttgagtttgt
121 ggaacctatg ctgtcatttt ttcaggggat gtttaccttc tatcatcagg gccatgaact
181 tgccaaagac ttcaatcact acaaaatgga actacagatc aacattcaga atacacggaa
241 tcgatttgaa ggaacaaggt cagaagtgga agagctcatg aacaaaatca gacagaatcc
301 caaggaccac aaacgagcaa gtcagtttac agccgaaggc tacctgtatg tccaggaaaa
361 aaggcctgct ccgtttggtt ccagttgggt caaacactat tgcatgtatc gaaaagcagc
421 aaagaagttc aacatgatcc catttgagca cagatctgga gggaaacttg gggacggaga
481 ggtgttcttt ttgaaagaat gtaccaagag gcatactgac tccattgaca gaaggttttg
541 ttttgacata gaagctgctg atcggcctgg cgtttccttg accatgcagg cattttccga
601 agaggaaagg aagcagtggt tggaagctct gggtggaaag gaagctctgt cccatagttt
661 taatacagcc atcatcccaa gaccagaagg aaatgcacag ttggataaga tggggttcac
721 aattatcaga aaatgcatca gtgccgttga aacacgaggt ataaatgacc aaggattgta
781 cagagttgtg ggggtgagtt caaaggtcca gagacttctg agtatgttga tggatgtaaa
841 aacatgcaat gaggtggacc tggagaattc tgcagattgg gaagtgaaga caataacaag
901 tgccttgaaa cagtatttga ggagtcttcc agagcctctc atgacctatg agttacatgg
961 agatttcatt gttccagcca aaagcggcag cccagaatct cgtgttaatg cgatccattt
1021 cttggtacac aaactgccag agaagaataa agagatgttg gatattttgg tgaaacactt
1081 aacaaatgtt tcaaatcact ccaagcagaa cctgatgact gtggcaaact taggagtggt
1141 gtttggacca actctgatga ggccacagga agaaactgtc gctgccctca tggacttgaa
1201 gtttcagaat attgttgtgg aaatcttaat tgaaaaccat gaaaagattt ttcggacgcc
1261 gcccgatact acattccctg agcccacctg cctgtcagca tcacccccaa atgcgccacc
1321 aaggcagtcg aagagacaag gccagagaac caagaggccc gtggccgtct acaatctttg
1381 tctggagctg gaagatggtg acaatcctta cccttccaag gaggacaccc ctaccagcag
1441 tctggactca ctttcctccc cgtctcccgt gactacagct gtccctgggc ctcctggacc
1501 agacaaaaac caccttctgg cagatggagg gagctttgga gactgggcat ccactatccc
1561 aggccagacc cgatcgtcta tggtccagtg gcttaaccca cagtctccaa ccacaacaag
1621 ctccaactca gctgtgacac ctctttcacc cgggtcgtcc cctttcccct tttctcctcc
1681 tgctactgta gcggacaagc cacctgaaag catccgcagt cggaaggctc gagccgtgta
1741 tccgtgtgaa gcagaacaca gctcggaatt atcttttgaa ataggagcaa tttttgagga
1801 tgtacaaacc tccagggaac ctggctggct agaagggact ctgaacggca agagggggct
1861 gattccacag aactacgtca agctgctgta gctcctggcc tcagagcccc ctgctgaccc
1921 tggcacccag ggacctgcct gggggcagag agctgtcttc ctcctccgag gctctgggct
1981 gcacccacag gtacctccac acttgggagt taccatcatc acagtcagcc ctgggggtgg
2041 ggggtggtgg gcagggatgg gacgcaccac acagaactgt gattgtggat caggagggga
2101 atgtcaggat tcgcaaaatg gacttttcat ttgtcaagta ttgggacttg tgatttttaa
2161 ttatccagca tatagaatga gagggagggc agccttctgc cacctgtgtc gcctccactg
2221 gcagtcacgc caccagagcc accctggctc cctctcctcc ctgagcacct gctgctgcga
2281 ttttaaaggg aactgtacta ctcgcagtga taggtttgca gagtgtgtgc ttggctgtgg
2341 cagcctagct tggagaagct gctgttggtg caagggagat ggtctcaagt cagagggaag
2401 cagagacgcg cgtctcaagc ctgcccttcc tagacggcca cctgcaggac cccacactca
2461 ctgcactggc agcgtgcact ggcgtatttg taacaggctt ctcggtgctc ctcacccgtg
2521 tgctgttttc caaacaccac ctttttgcct caaggtctct gtaaatgaaa taaactgtaa
2581 tttactaaaa aaaaaaaaaa aaaa
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