LOCUS BC011837 1781 bp mRNA linear HUM 19-DEC-2003
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 7, mRNA
(cDNA clone MGC:20075 IMAGE:3945721), complete cds.
ACCESSION BC011837
VERSION BC011837.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1781)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011837.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507712.
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000035483"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20075 IMAGE:3945721"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1781
/gene="DNAJC7"
/gene_synonym="DANJC7"
/gene_synonym="TPR2"
/gene_synonym="TTC2"
/db_xref="GeneID:7266"
/db_xref="MIM:601964"
CDS 1..1485
/gene="DNAJC7"
/gene_synonym="DANJC7"
/gene_synonym="TPR2"
/gene_synonym="TTC2"
/codon_start=1
/product="DNAJC7 protein"
/protein_id="AAH11837.2"
/db_xref="GeneID:7266"
/db_xref="MIM:601964"
/translation="MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDY
NEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLRE
GKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRK
VVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGL
CLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAY
ELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRR
AQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNA
SEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSG
QDLDEEGMNMGDFDPNNIFKAFFGGPGGFSFEASGPGNFFFQFG"
misc_feature 85..378
/gene="DNAJC7"
/gene_synonym="DANJC7"
/gene_synonym="TPR2"
/gene_synonym="TTC2"
/note="TPR; Region: Tetratricopeptide repeat domain"
/db_xref="CDD:cd00189"
misc_feature 769..1080
/gene="DNAJC7"
/gene_synonym="DANJC7"
/gene_synonym="TPR2"
/gene_synonym="TTC2"
/note="TPR; Region: Tetratricopeptide repeat domain"
/db_xref="CDD:cd00189"
misc_feature 1141..1347
/gene="DNAJC7"
/gene_synonym="DANJC7"
/gene_synonym="TPR2"
/gene_synonym="TTC2"
/note="DnaJ; Region: DnaJ domain. DnaJ domains (J-domains)
are associated with hsp70 heat-shock system and it is
thought that this domain mediates the interaction.
DnaJ-domain is therefore part of a chaperone (protein
folding) system. The T-antigens are confirmed as DnaJ
containing domains from literature"
/db_xref="CDD:pfam00226"
BASE COUNT 582 a 342 c 459 g 398 t
ORIGIN
1 atggcggctg ccgcggagtg cgatgtggta atggcggcga ccgagccgga gctgctcgac
61 gaccaagagg cgaagaggga agcagagact ttcaaggaac aaggaaatgc atactatgcc
121 aagaaagatt acaatgaagc ttataattat tatacaaaag ccatagatat gtgtcctaaa
181 aatgctagct attatggtaa tcgagcagcc accttgatga tgcttggaag gttccgggaa
241 gctcttggag atgcacaaca gtcagtgagg ttggatgaca gttttgtccg gggacatcta
301 cgagagggca agtgccacct ctctctgggg aatgccatgg cagcatgtcg cagcttccag
361 agagccctag aactggatca taaaaatgct caggcacaac aagagttcaa gaatgctaat
421 gcagtcatgg aatatgagaa aatagcagaa acagattttg agaagcgaga ttttcggaag
481 gttgttttct gcatggaccg tgccctagaa tttgcccctg cctgccatcg cttcaaaatc
541 ctcaaggcag aatgtttagc aatgctgggt cgttatccag aagcacagtc tgtggctagt
601 gacattctac gaatggattc caccaatgca gatgctctgt atgtacgagg tctttgcctt
661 tattacgaag attgtattga gaaggcagtt cagtttttcg tacaggctct caggatggct
721 cctgaccacg agaaggcctg cattgcctgc agaaatgcca aagcactcaa agcaaagaaa
781 gaagatggga ataaagcatt taaggaagga aattacaaac tagcatatga actgtacaca
841 gaagccctgg ggatagaccc caacaatata aaaacaaatg ctaaactcta ctgtaatcgg
901 ggtacggtta attccaagct taggaaacta gatgatgcaa tagaagactg cacaaatgca
961 gtgaagcttg atgacactta cataaaagcc tacttgagaa gagctcagtg ttacatggac
1021 acagaacagt atgaagaagc agtacgagac tatgaaaaag tataccagac agagaaaaca
1081 aaagaacaca aacagctcct aaaaaatgcg cagctggaac tgaagaagag taagaggaaa
1141 gattactaca agattctagg agtggacaag aatgcctctg aggacgagat caagaaagct
1201 tatcggaaac gggccttgat gcaccatcca gatcggcata gtggagccag tgctgaggtt
1261 cagaaggagg aggagaagaa gttcaaggaa gttggagagg cctttactat cctctctgat
1321 cccaagaaaa agactcgcta tgacagtgga caggacctag atgaggaggg catgaatatg
1381 ggtgattttg atccaaacaa tatcttcaag gcattctttg gcggtcctgg cggcttcagc
1441 tttgaagcat ctggtccagg gaatttcttt tttcaatttg gctaatgaag ggcaaccacc
1501 cagaacccag aaaatgcaga ttcactcagt ttaatcttga atgtggaaac agttcacctc
1561 ctcccttcat cacgtctccg tgtgcttaga gcagtttcgt tttctcagtt ggatgccctg
1621 tgtctctgtg agtggggtgg agcaaaggga accaatgccg aagaccgagg gcaggggagg
1681 gaggcggggg tggacaggga ggcagcttgt gaatttttgt tttactgttt aactttatta
1741 aaaaagaaaa aaaaaaagag aaaaaaaaaa aaaaaaaaaa a
//