LOCUS BC011831 2352 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblB
type, mRNA (cDNA clone MGC:20496 IMAGE:3938643), complete cds.
ACCESSION BC011831
VERSION BC011831.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011831.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41053624.
FEATURES Location/Qualifiers
source 1..2352
/db_xref="H-InvDB:HIT000035478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20496 IMAGE:3938643"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2352
/gene="MMAB"
/gene_synonym="ATR"
/db_xref="GeneID:326625"
/db_xref="HGNC:HGNC:19331"
/db_xref="MIM:607568"
CDS 18..770
/gene="MMAB"
/gene_synonym="ATR"
/codon_start=1
/product="methylmalonic aciduria (cobalamin deficiency)
cblB type"
/protein_id="AAH11831.1"
/db_xref="GeneID:326625"
/db_xref="HGNC:HGNC:19331"
/db_xref="MIM:607568"
/translation="MAVCGLGSRLGLGSRLGLRGCFGAARLLYPRFQSRGPQGVEDGD
RPQPSSKTPRIPKIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALEL
VTEKGHTFAEELQKIQCTLQDVGSALATPCSSAREAHLKYTTFKAGPILELEQWIDKY
TSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMGETDANVAKFLNRLSD
YLFTLARYAAMKEGNQEKIYMKNDPSAESEGL"
BASE COUNT 556 a 571 c 683 g 542 t
ORIGIN
1 gtcaagcagc ctggctcatg gctgtgtgcg gcctggggag ccgtcttggc ctggggagcc
61 gtcttggcct gcgcgggtgc ttcggcgccg ccaggctcct gtatccccgt ttccagagcc
121 gcggccctca gggcgtggaa gacggggaca ggccacagcc ttcctcgaag acacccagga
181 tccccaagat ttacaccaaa acgggagaca aagggttttc tagtaccttc acaggagaaa
241 ggagacccaa agatgaccaa gtgtttgaag ccgtgggaac tacagatgaa ttaagttcag
301 ctattgggtt tgctctggaa ttagtcacag aaaagggcca tacatttgcc gaagagcttc
361 agaaaatcca gtgcacattg caggacgtcg gctcggccct ggcgacacca tgctcctcgg
421 cccgggaggc tcacttaaag tataccacgt tcaaggcggg gcccatcctg gagctggagc
481 agtggatcga caagtacacc agccagctcc caccactcac ggccttcatc ctgccttcgg
541 gaggcaagat cagctcggcg ctgcatttct gccgggccgt gtgccgccgg gccgagagac
601 gtgtggtgcc tcttgtccag atgggagaga ccgatgcgaa cgtggccaag ttcttaaaca
661 gactcagtga ctatctcttc acgctagcca gatatgcagc catgaaggag gggaatcaag
721 agaaaatata catgaaaaat gacccatcgg ccgagtctga gggactctga aatcacagaa
781 agtgggagct tggaggatcc ctccatggcg atggccgtgg agagaggagc ttgcccttct
841 ggggtcctgg ttcctgaaga gctcacccag agaggctcaa agcagccttt tgtcccagct
901 cagctttgat ctacacctct tgccaccttc ctcaagggac tgtgaccctt tggggattct
961 gtccctgacc ctgcttcccc aagctctcct gggtcttgga gggatgtggg aatgaattgg
1021 cattgcagga aagacaggta aagtgattgc tgcaatgaga aggagctgtg cggaaaagga
1081 ataaaagttg gaaaggctgg agccgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
1141 gtgtgtgtga gagagagccc tcccactgcc agctcaggtt gttcacagat ttggaatggg
1201 accagaggcc cttgaaaatg taattgtgat ttacctgtgc caaaggtgct ttaaatgtca
1261 catttgtaaa ggggaaggcg gacaagattt ggaagtttag tcacctctga gccacccatc
1321 accgccaaag tgtgggggaa ggatagctgc agattgacag gcgaggctca gaaactcctg
1381 gcttagattg aagtgtgtgt gatgggggtg cagcttagag gaccccctct gaaagggatg
1441 gagatgctga tgagaacaac actaccactt gaaggtgaac attccctgtc tggttggact
1501 gagtcaaggg tctgcggtgc agcatcttca gcttgagaaa atgaggttgt cagtttccag
1561 caaggctgac atccaccaga ctgatttctc cgatgttgca cttggctggc ttatgcctct
1621 gagatcggtg ccacggctgt atttatttca gttgtcactg ctgctccctc ctgctatgaa
1681 acgacactgc cagtgccagc agtgtccttg ggaaaggcaa tatttatgaa gggcagaaga
1741 ggcagcccca agaacctaaa gactgcaggc tgctaattgc aggaaatgac tttggaaggg
1801 caggctcttg tccagtttca gggctgaaat gcctggcgaa ctccattcag ccatcacata
1861 ttgactgagt ggctgcttag catgggccac cgcgctaggc tcgggacagc tggtctttcc
1921 ggccatcttt cttgctggca agtcagcaaa cattaccttc ttagtcacgt gcatattttt
1981 gccttcattc ttaccacctg gcctgcaaag tttgcaggag ggccaggtat attcacttgt
2041 gtcttctggg tcctttcatt gctgacaggc tgtgatggcc ctcttgagcc ttgggcaggg
2101 tgggtgaggt gcagatgacc aggagtgtgt gaatgccttc caggaggtgg ctttgttccg
2161 tgcctccctg cccccatcgt cactaccagg tctggtacgg agtcggtgct cagtgtttgc
2221 aaaacagagc tgaaaacgga ctttgggagg ccgaggcagg cagatcacct gaggtcagga
2281 gtttgagacc agcctggtca acatggtaaa accccatttc tgctaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aa
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