LOCUS BC011806 1774 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens pleckstrin homology domain containing, family F (with FYVE domain) member 2, mRNA (cDNA clone MGC:19473 IMAGE:4335031), complete cds. ACCESSION BC011806 VERSION BC011806.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1774) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1774) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC011806.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: p Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543413. FEATURES Location/Qualifiers source 1..1774 /db_xref="H-InvDB:HIT000035464" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19473 IMAGE:4335031" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1774 /gene="PLEKHF2" /gene_synonym="FLJ13187" /gene_synonym="PHAFIN2" /gene_synonym="ZFYVE18" /db_xref="GeneID:79666" /db_xref="HGNC:HGNC:20757" CDS 225..974 /gene="PLEKHF2" /gene_synonym="FLJ13187" /gene_synonym="PHAFIN2" /gene_synonym="ZFYVE18" /codon_start=1 /product="pleckstrin homology domain containing, family F (with FYVE domain) member 2" /protein_id="AAH11806.1" /db_xref="GeneID:79666" /db_xref="HGNC:HGNC:20757" /translation="MVDRLANSEANTRRISIVENCFGAAGQPLTIPGRVLIGEGVLTK LCRKKPKARQFFLFNDILVYGNIVIQKKKYNKQHIIPLENVTIDSIKDEGDLRNGWLI KTPTKSFAVYAATATEKSEWMNHINKCVTDLLSKSGKTPSNEHAAVWVPDSEATVCMR CQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPSQSSKPVRICDFCYDLLSAGDMAT CQPARSDSYSQSLKSPLNDMSDDDDDDDSSD" BASE COUNT 500 a 346 c 395 g 533 t ORIGIN 1 ggaggggcgg gggagtcacc tgcgagcggc tgcgctggcg gccagcccgc ccaccgcgtc 61 tggatcgcgc cggctgcgcg gggctgcgga cagcacacac cctggaaggc cccggcgggg 121 aacgggcaga gtccgcgccc tgcgtccgcg accaggagga tcggaccttc gccttcgctg 181 tcgccgccgc cgccgcccgc ggccgtcggg gctattagtg aaagatggtg gatcgcttgg 241 caaacagtga agcaaatact agacgtataa gtatagtgga aaactgtttt ggagcagctg 301 gtcaaccttt aactatacct ggacgagttc ttattggaga aggagtattg actaagttgt 361 gcaggaaaaa gcccaaagca aggcagtttt tcttgtttaa tgatattctt gtatatggca 421 atattgtcat ccagaagaaa aaatataaca aacaacatat tattcccctg gaaaatgtca 481 ctattgattc catcaaagat gagggagact taaggaatgg atggctaatc aagacaccaa 541 ctaaatcttt tgcagtttat gctgccactg ctacggagaa atcagaatgg atgaatcata 601 taaataaatg tgttactgat ttactctcca aaagtgggaa gacacccagt aatgaacatg 661 ctgctgtctg ggttcctgac tctgaggcaa ctgtatgtat gcgttgtcag aaagcaaaat 721 tcacacctgt taatcgtcgc caccattgcc gcaaatgtgg ttttgttgtc tgtgggccct 781 gctctgaaaa gagatttctt cttcccagcc agtcctctaa gcctgtgcgg atttgtgact 841 tctgctatga cctgctttct gctggggaca tggccacatg ccagcctgct agatcagact 901 cttacagcca gtcattgaag tctcctttaa atgatatgtc tgatgatgat gacgatgatg 961 atagcagtga ctaaggacac atttgggagt atttaatcag gtgtggctat ctgagaaatc 1021 aactttgggg gaaatgtaag attctgagct ctctctctgt tttgttctag ccatgaattt 1081 gcctgagaaa cttgtaacct atgtgcctca atatattcca tagaaagtag gtccccctgc 1141 cttctcccac tcctcacact cttctacagg gataggcttt tgcaaatata tcagataaat 1201 tttttgtttc ttgtttattt ttaggttatt ttcttggaag gttgggaaaa gatgtttgtt 1261 ttaacaggtc atgtactacg ttgttgtttt catttctgtt ataagtaaaa ctaaaagcac 1321 agaatggtgg gaaaggggct ataatgtggt tcattaataa tgttagcagc ttttttctaa 1381 ccatcctgtc taatggttaa gacaccagta acaaaaacac atgatttgga aatactttgg 1441 ctttttcata tacctagtgg tgccttatca taatagcact gttacatgaa ataagcccct 1501 accttcttac tttctggttt gttgaaaaaa tacactggtg ctctttgaag tgataaaatg 1561 agtgtttatg aatgggtgta attaggaaat acttctcatc tgacagctac aaataactaa 1621 gtttggaggt attttcactc tatatgaata aatatttttc cataaaatag ttgtgattat 1681 atttttgttt tatataggtc ccaaattata attgtcaaat atatatttta aattaataaa 1741 agttgtcatt cttaggaaaa aaaaaaaaaa aaaa //