LOCUS BC011783 1939 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RNA pseudouridylate synthase domain containing 1, mRNA (cDNA clone MGC:19600 IMAGE:3937184), complete cds. ACCESSION BC011783 VERSION BC011783.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1939) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1939) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC011783.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: j Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41152102. FEATURES Location/Qualifiers source 1..1939 /db_xref="H-InvDB:HIT000035451" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19600 IMAGE:3937184" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1939 /gene="RPUSD1" /gene_synonym="MGC19600" /gene_synonym="RLUCL" /db_xref="GeneID:113000" /db_xref="HGNC:HGNC:14173" CDS 1..939 /gene="RPUSD1" /gene_synonym="MGC19600" /gene_synonym="RLUCL" /codon_start=1 /product="RNA pseudouridylate synthase domain containing 1" /protein_id="AAH11783.1" /db_xref="GeneID:113000" /db_xref="HGNC:HGNC:14173" /translation="MEPGSVENLSIVYRSRDFLVVNKHWDVRIDSKAWRETLTLQKQL RYRFPELADPDTCYGFRFCHQLDFSTSGALCVALNKAAAGSAYRCFKERRVTKAYLAL LRGHIQESRVTISHAIGRNSTEGRAHTMCIEGSQGCENPKPSLTDLVVLEHGLYAGDP VSKVLLKPLTGRTHQLRVHCSALGHPVVGDLTYGEVSGREDRPFRMMLHAFYLRIPTD TECVEVCTPDPFLPSLDACWSPHTLLQSLDQLVQALRATPDPDPEDRGPRPGSPSALL PGPGRPPPPPTKPPETEAQRGPCLQWLSEWTLEPDS" BASE COUNT 346 a 654 c 607 g 332 t ORIGIN 1 atggagccag gcagcgtgga gaacctgtcc atcgtgtacc ggagccgcga cttcctggtg 61 gtcaacaagc actgggacgt tcgcattgac agcaaggcgt ggcgggagac tctgaccctg 121 cagaagcagc tgcggtaccg ctttcccgag ctggccgacc ctgacacctg ctacgggttc 181 aggttctgcc accagctgga tttctccacc agcggggcgc tgtgcgtggc cctaaacaag 241 gcagccgccg gcagcgcgta caggtgcttc aaggagcggc gcgtgaccaa ggcttacctg 301 gcattgctgc gggggcacat ccaggagagc cgggtaacca tcagccatgc cattggcagg 361 aacagcacgg agggccgggc ccacaccatg tgcatcgagg gctcgcaggg ttgtgagaac 421 ccaaagccaa gcctcacaga tctcgtggtt ctggaacacg ggctgtacgc aggcgatcct 481 gtctccaaag tgctgctgaa gccgctcacg ggccggacac accagctgcg cgtgcactgc 541 agtgccctgg gccaccccgt ggtgggcgac ctgacctacg gagaagtctc gggccgggag 601 gaccggccgt tcagaatgat gctgcacgct ttctacctgc gcatccccac ggacaccgag 661 tgtgtggagg tctgcacgcc tgaccccttc ctgccctccc tggatgcctg ctggagcccc 721 cacacactgc tgcagtcgct ggaccagctc gtgcaggcct tacgggccac ccccgaccct 781 gaccccgagg ataggggccc caggccaggc agcccctccg cactcctgcc tgggcccggc 841 cggcctcctc cacccccaac caagccccct gagactgagg cacagcgggg cccctgcctg 901 cagtggctgt cggagtggac gctggaaccg gacagctgag agccgtgggg ctggggcagg 961 gggtgtcagc tgcacagcgg gactctaggg agatgggcga gcgagcgtct gctcactggc 1021 tctggggcct cgaggtgcca ggcagcatca ggcccactgg gttgccccgg ccaggcctgc 1081 gaggaagggc tgaggtgggg ccggcagggg gcgccaggca gccgtgatca caggtgacga 1141 ccgcaccgcg gccgtgggac tgatgcggga tcccgagggc cttcctgccc acatgccccg 1201 ggagaaaccg aggcccctcc ctcctcctgg aacagcttcc ggctctcaag cgtcacccca 1261 ggggcgtcag ttttacggac tcaaggtcac ctcaggaaga ggcagggcca ggttttggga 1321 taggctttgc ctccaggatg ggctgctcct gggcctggtg agctactgcc cccaacctac 1381 cctctagagg ggctgggaag ggccgttctg ggctcacctg gcctgggaga cccatctggt 1441 ccctgcgtcc tctgcccctc actgctctgt gcagatcctg tcgccctcag ctgcctcctc 1501 ccgagaccta atggtccctg ctgggctcga gtctgcaggc ccggctgcgt gtgccttggc 1561 ctcactgtac cagtggttcc ctctctgccc ggattctgag ctcagtgtgg tgtttggtgc 1621 acaggggttg gtcaggggcc atggccaagg ccctgccacg cacgcccatc cctcagatcc 1681 actgtgagca ccaacctgct gcagtctctt gggcccctgc tggcagctct gccacgtcac 1741 cgcctgcctg gctcccacac agccatgcat tgtcactctg cctccgggac cccagcttgg 1801 gagctgtggg tctgccaggt cccacctcct ctgtccccca tgccacaacc tgggctcctg 1861 gctacagcag ggctccaggg actccaaata aatgttcagt gactggcaaa aaaaaaaaaa 1921 aaaaaaaaaa aaaaaaaaa //