LOCUS BC011782 1491 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens RAB3A, member RAS oncogene family, mRNA (cDNA clone
MGC:19494 IMAGE:3939176), complete cds.
ACCESSION BC011782
VERSION BC011782.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011782.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147654.
FEATURES Location/Qualifiers
source 1..1491
/db_xref="H-InvDB:HIT000035450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19494 IMAGE:3939176"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1491
/gene="RAB3A"
/db_xref="GeneID:5864"
/db_xref="HGNC:HGNC:9777"
/db_xref="MIM:179490"
CDS 135..797
/gene="RAB3A"
/codon_start=1
/product="RAB3A, member RAS oncogene family"
/protein_id="AAH11782.1"
/db_xref="GeneID:5864"
/db_xref="HGNC:HGNC:9777"
/db_xref="MIM:179490"
/translation="MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYAD
DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMY
DITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFE
FFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDC
AC"
BASE COUNT 324 a 496 c 381 g 290 t
ORIGIN
1 gaggactgca ggggcctgag ccgctgctgc cgccgccgcc gcgcagcccc acatcaacgc
61 accggggtcc tgtcaccgcc accgccaaaa aagtcaccgc cgctagggtc gccgttgcat
121 cggtgcaggg caagatggca tccgccacag actcgcgcta tgggcagaag gagtcctcgg
181 atcagaactt cgactacatg ttcaagattc tcatcatcgg caacagcagc gtgggcaaga
241 cgtccttcct cttccgctat gctgacgact cgttcacgcc tgccttcgtc agcaccgtgg
301 gcatcgactt caaggtcaag accatctatc gcaacgacaa gaggatcaag ctgcagatct
361 gggacacagc agggcaagag cggtaccgga ccatcaccac cgcatactac cggggcgcta
421 tgggcttcat cctcatgtat gacatcacca acgaggaatc cttcaatgca gtgcaggact
481 ggtccaccca gatcaagacc tactcatggg acaatgccca ggtgctgctg gtaggaaaca
541 agtgtgacat ggaggatgag cgggtggtgt catcagaacg tggccggcag ctagctgacc
601 accttgggtt cgagttcttt gaggcaagcg ccaaggacaa cattaacgtc aagcagacct
661 ttgagcgcct ggtggatgtc atctgcgaga agatgtccga gtcgttggac acggcggacc
721 ctgcggtcac aggcgccaag cagggcccac agctcagtga ccagcaggtg ccaccgcacc
781 aggactgcgc ctgctgagag ccatcccact ccctttcccc tcttccctgt cttccccacc
841 ttcccccaac tacccgggcc tgacccggcc cctaccagcc acgggcacaa gacccctgct
901 cctgacttag cccgtcaccc ttatttatta ttgtagctat ttatttattt attgaagatg
961 tcccccaggg gcccaggctc ccctgcccgc cccaagccct gcccctcctg tacatatagc
1021 cctttcccca ctcagctgtg gtgtctcgtg gccccgtgaa ctcaccgctc accctcctga
1081 accccccccc cgcctttttt taaaattcac ccccatccac agttgtcagt tgtgaagagg
1141 ggccagatga caccctaaag caggctgatc gggcaatggg aggtggccag gcctgccagc
1201 ccctcggctc tgccgcggtg ggccgaggcc gctgttgggg gtttccctgt gtggaccatg
1261 gggatcagag tctggcctgc caggctcctc tccccgtttt ctcttttggt gggggggtgt
1321 gctgtgggta ttcaccaccc tgggaccccc cccccccccg cccaccagac ctgttctgac
1381 ctcatgagtg tcaaacgtgc cccccagttc cttaggagat gtcatgacaa cactacacgc
1441 acccaataaa gcgaatggac catcaaaaaa aaaaaaaaaa aaaaaaaaaa a
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