LOCUS BC011778 2106 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens WD repeat domain 77, mRNA (cDNA clone MGC:19809
IMAGE:3941878), complete cds.
ACCESSION BC011778
VERSION BC011778.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2106)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011778.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000035446"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19809 IMAGE:3941878"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2106
/gene="WDR77"
/gene_synonym="HKMT1069"
/gene_synonym="MEP50"
/gene_synonym="MGC2722"
/gene_synonym="Nbla10071"
/gene_synonym="RP11-552M11.3"
/db_xref="GeneID:79084"
/db_xref="HGNC:HGNC:29652"
CDS 80..1108
/gene="WDR77"
/gene_synonym="HKMT1069"
/gene_synonym="MEP50"
/gene_synonym="MGC2722"
/gene_synonym="Nbla10071"
/gene_synonym="RP11-552M11.3"
/codon_start=1
/product="WD repeat domain 77"
/protein_id="AAH11778.1"
/db_xref="GeneID:79084"
/db_xref="HGNC:HGNC:29652"
/translation="MRKETPPPLVPPAAREWNLPPNAPACMERQLEAARYRSDGALLL
GASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGA
VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL
SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL
AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE
DCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPA
PGPASVTE"
BASE COUNT 510 a 505 c 536 g 555 t
ORIGIN
1 accacgtggg gtttgctgcc ggagcggagt ctccggccgg cgtccagttt gagtctaggt
61 tggagttgga accgtggaga tgcggaagga aaccccaccc cccctagtgc ccccggcggc
121 ccgggagtgg aatcttcccc caaatgcgcc cgcctgcatg gaacggcagt tggaggctgc
181 gcggtaccgg tccgatgggg cgcttctcct cggggcctcc agcctgagtg ggcgctgctg
241 ggccggctcc ctctggcttt ttaaggaccc ctgtgccgcc cccaacgaag gcttctgctc
301 cgccggagtc caaacggagg ctggagtggc tgacctcact tgggttgggg agagaggtat
361 tctagtggcc tccgattcag gtgctgttga attgtgggaa ctagatgaga atgagacact
421 tattgtcagc aagttctgca agtatgagca tgatgacatt gtgtctacag tcagtgtctt
481 gagctctggc acacaagctg tcagtggtag caaagacatc tgcatcaagg tttgggacct
541 tgctcagcag gtggtactga gttcataccg agctcatgct gctcaggtca cttgtgttgc
601 tgcctctcct cacaaggact ctgtgtttct ttcatgcagc gaggacaata gaattttact
661 ctgggatacc cgctgtccca agccagcatc acagattggc tgcagtgcgc ctggctacct
721 tcctacctcg ctggcttggc atcctcagca aagtgaagtc tttgtctttg gtgatgagaa
781 tgggacagtc tcccttgtgg acaccaagag tacaagctgt gtcctgagct cagctgtaca
841 ctcccagtgt gtcactgggc tggtgttctc cccacacagt gttcccttcc tggcctctct
901 cagtgaagac tgctcacttg ctgtgctgga ctcaagcctt tctgagttgt ttagaagcca
961 agcccacaga gactttgtga gagatgcgac ttggtccccg ctcaatcact ccctgcttac
1021 cacagtgggc tgggaccatc aggtcgtcca ccacgttgtg cccacagaac ctctcccagc
1081 ccctggacct gcaagtgtta ctgagtagat tggatttaag acaaaaagca agtcccccat
1141 gagtgtccac ttctttgccc tgccctctca gcttgtgaga caacacagga gccttctata
1201 gtatgttgat atgctagatc tgtgccgtta ataggcatcg tctctcagcc tgagggaggc
1261 tggattctgg gttcctgtag tcacagggag gaaaagcttt cttaaaaatg gacatgtatg
1321 tgcgtgtgag tgtgtgtgta gatttatagt ttttggtagt ggcaggaata aaaaaaatcc
1381 atcctacatc ttccctaagc actgcctctc tctcaccccc caaaacaagt tgacgaaagg
1441 gttttatgta gctgtctatg aggaattggc cgtgtctggg tgggttatgg gatgtgggca
1501 tccctgggtt cttggaagca gctcttatgc tactcataga gatgggattg actttatttt
1561 tttatagtgc ttaattcacc attatgagaa atgcttccag tcacaaaaat gcagcccagc
1621 tcactctgag gaagaagcag gacttggtac ggttttacac aactccttac cattaaactg
1681 aatcagaaat ccattttctg gctgaataaa aagtttggct tgcctgtgta atgcccactc
1741 ccttccccct ggctccctag tgatgggaca tatatgagag agaagtgttt ttctatcata
1801 gacaccatag gggaaagttt ggggatgaag gagagcttaa aggtgtttca attaagttag
1861 aaaactgaca caggctgttg agaattcttt gccacttttc ccaccccaaa acagcatggg
1921 gcctgacatc ttctgccctg gtcccctttc tcttgatgtg gaaagtctga atgcagtatt
1981 tatagacttc taaggtttta aaatccagta tcaagaagaa aatcagaaat actggttggt
2041 gaaataaaga gtttaggcat tgttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaa
//