LOCUS BC011760 1841 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens WD repeat domain 82, mRNA (cDNA clone IMAGE:3622932),
complete cds.
ACCESSION BC011760
VERSION BC011760.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011760.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361950
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1841
/db_xref="H-InvDB:HIT000035432"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3622932"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1841
/gene="WDR82"
/gene_synonym="MST107"
/gene_synonym="MSTP107"
/gene_synonym="PRO2730"
/gene_synonym="PRO34047"
/gene_synonym="SWD2"
/gene_synonym="WDR82A"
/db_xref="GeneID:80335"
/db_xref="HGNC:HGNC:28826"
/db_xref="MIM:611059"
CDS 203..616
/gene="WDR82"
/gene_synonym="MST107"
/gene_synonym="MSTP107"
/gene_synonym="PRO2730"
/gene_synonym="PRO34047"
/gene_synonym="SWD2"
/gene_synonym="WDR82A"
/codon_start=1
/product="WDR82 protein"
/protein_id="AAH11760.1"
/db_xref="GeneID:80335"
/db_xref="HGNC:HGNC:28826"
/db_xref="MIM:611059"
/translation="MPSLPTTNCVHSLQMIPPLSPAPNQELVLGLCYMSYLAFLYMTF
DFCCLYFSTVYAPSFKYICVHTDTHICVCVCIYLSSVVSKSSAEADGVLQPRRHPASL
LIVFATSISESSLLIFSFQKTEAKLIVFAVSLAAK"
BASE COUNT 464 a 401 c 450 g 526 t
ORIGIN
1 gtagcaggtg agttcctagg gctggaaggt ttagcagcag cctggtgcag tgccctgtca
61 tcaagacaaa cccacggtcc tcctgggtgc ctaccaagct tggtttgtac aaaagcaagg
121 tgggagtcta tttttgtaca tgagatacat cacacttacc tgtgggccag tattgtgaag
181 tgagtctgag ttgtttacac tgatgccttc cctgcccacc acaaattgtg tacatagtct
241 tcagatgata ccaccccttt ccccagctcc caaccaagag ctggttctag gcctgtgtta
301 tatgtcatat ttagcgtttt tatatatgac ctttgatttc tgttgtttgt attttagcac
361 agtgtatgca ccttcattta aatacatctg tgtgcataca gatacgcata tatgtgtgtg
421 cgtatgcata tatctctcat ctgtagtttc caagagttca gctgaagcag atggagtcct
481 gcagcccagg agacaccctg catccctgct aatagtgttt gccacaagta ttagtgagtc
541 ttccttatta atattttcat ttcagaagac tgaagcaaag ctgatagtgt ttgctgtttc
601 tttggcagct aagtgagggt cttgggatga cttgctgtgt tcctcaagct gcactttggg
661 gccatctctg cagtattagc cccctttttg cttggtggta ctctgtctgt gcctgtgtgt
721 gtgtgtgata gtcactcttg catggcttcc atgtctggtt tgtggcattt ggggataagg
781 tgctgaagcc agagcatttg cagtttgttt gaggcctcgt tgccaatgat agatcactcc
841 tgttgacctg gtatgtctgc ttgcttgctg cttttccttg ctttctcttg gaagaggaaa
901 ggactctggt caggcccagg ctgagtgaga tgagctgcag ctggctcatg gccttcttag
961 agcagagaga ggagtatgtc attttactaa gttcctaaac aaacatttat gcaggcaaca
1021 ctccttgcag atccagaaac tgaggcacaa tagggttatg acttgctcaa gaatatgtag
1081 ctgctagggg gtaaatcaag gcatcacaat ttctgttcag cgggcaggaa taggctgtga
1141 attgctagca cttttttttt tttaagcaat tactttttga cttgttcctc tgaaagtgca
1201 agaggcgtac acctttccca aatgtagact agaatctgca ggatgccacc cactgtatag
1261 ttctgctttc ccagagagga agaactttta gaaaccaaat gatcttaatt gttattgccc
1321 acccctggct tttccgggta gaaaattcac agtaggaatg attgttaaga gagagtgctt
1381 ggaaccatgg gttaacagga aaggctacct aacttcacat atctgcaacc agagcagcca
1441 ccaagcatta cttagcagca ggaaaatgat tgtatttgag ttcctgtgtg tccaaaactg
1501 aggcaccatg ttctttgaaa acatgccacc tcaaggctgg gcgcggtggc tcacacctgt
1561 aatcccagca ctttgggagg ccgaggcggg cggatcaccg gaggtcggga gtttgagacc
1621 agcctgacca acatggagaa accccatctc tactaaaaat acaaaattag ccgggcgtgg
1681 tggcatgcgc ctataatctc agctacttgg gaggctgagg caggagaatt gcttgaaccc
1741 aggaggcgga ggttgcggtg agttgagatc gtgccattgc actccggcct gggcaacaac
1801 agcaaaactc cgtctcaaaa aaaaaaaaaa aaaaaaaaaa a
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