LOCUS BC011757 1013 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens growth arrest and DNA-damage-inducible, alpha, mRNA
(cDNA clone MGC:19584 IMAGE:3530326), complete cds.
ACCESSION BC011757
VERSION BC011757.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1013)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1013)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011757.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: d Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9790904.
FEATURES Location/Qualifiers
source 1..1013
/db_xref="H-InvDB:HIT000035429"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19584 IMAGE:3530326"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1013
/gene="GADD45A"
/gene_synonym="GADD45"
/db_xref="GeneID:1647"
/db_xref="HGNC:HGNC:4095"
/db_xref="MIM:126335"
CDS 282..779
/gene="GADD45A"
/gene_synonym="GADD45"
/codon_start=1
/product="growth arrest and DNA-damage-inducible, alpha"
/protein_id="AAH11757.1"
/db_xref="GeneID:1647"
/db_xref="HGNC:HGNC:4095"
/db_xref="MIM:126335"
/translation="MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAA
KLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELL
LLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVI
NLPER"
BASE COUNT 242 a 251 c 340 g 180 t
ORIGIN
1 cagtggctgg gaggcagcgg cccaattagt gtcgtgcggc ccgtggcgag gcgaggtccg
61 gggagcgagc gagcaagcaa ggcgggaggg gtggccggag ctgcggcggc tggcacagga
121 ggaggagccc gggcgggcga ggggcggccg gagagcgcca gggcctgagc tgccggagcg
181 gcgcctgtga gtgagtgcag aaagcaggcg cccgcgcgct agccgtggca ggagcagccc
241 gcacgccgcg ctctctccct gggcgacctg cagtttgcaa tatgactttg gaggaattct
301 cggctggaga gcagaagacc gaaaggatgg ataaggtggg ggatgccctg gaggaagtgc
361 tcagcaaagc cctgagtcag cgcacgatca ctgtcggggt gtacgaagcg gccaagctgc
421 tcaacgtcga ccccgataac gtggtgttgt gcctgctggc ggcggacgag gacgacgaca
481 gagatgtggc tctgcagatc cacttcaccc tgatccaggc gttttgctgc gagaacgaca
541 tcaacatcct gcgcgtcagc aacccgggcc ggctggcgga gctcctgctc ttggagaccg
601 acgctggccc cgcggcgagc gagggcgccg agcagccccc ggacctgcac tgcgtgctgg
661 tgacgaatcc acattcatct caatggaagg atcctgcctt aagtcaactt atttgttttt
721 gccgggaaag tcgctacatg gatcaatggg ttccagtgat taatctccct gaacggtgat
781 ggcatctgaa tgaaaataac tgaaccaaat tgcactgaag tttttgaaat acctttgtag
841 ttactcaagc agttactccc tacactgatg caaggattac agaaactgat gccaaggggc
901 tgagtgagtt caactacatg ttctgggggc ccggagatag atgactttgc agatggaaag
961 aggtgaaaat gaagaaggaa gctgtgttga aacagaaaaa aaaaaaaaaa aaa
//