LOCUS BC011710 1930 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum), mRNA (cDNA clone MGC:19523 IMAGE:3940241), complete cds. ACCESSION BC011710 VERSION BC011710.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1930) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1930) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC011710.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: j Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62953125. FEATURES Location/Qualifiers source 1..1930 /db_xref="H-InvDB:HIT000035394" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19523 IMAGE:3940241" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1930 /gene="P4HTM" /gene_synonym="EGLN4" /gene_synonym="HIFPH4" /gene_synonym="P4H-TM" /gene_synonym="PH-4" /gene_synonym="PH4" /gene_synonym="PHD4" /db_xref="GeneID:54681" /db_xref="HGNC:HGNC:28858" CDS 6..1697 /gene="P4HTM" /gene_synonym="EGLN4" /gene_synonym="HIFPH4" /gene_synonym="P4H-TM" /gene_synonym="PH-4" /gene_synonym="PH4" /gene_synonym="PHD4" /codon_start=1 /product="prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)" /protein_id="AAH11710.3" /db_xref="GeneID:54681" /db_xref="HGNC:HGNC:28858" /translation="MAAAAVTGQRPETAAAEEASRPQWAPPDHCQAQAAAGLGDGEDA PVRPLCKPRGICSRAYFLVLMVFVHLYLGNVLALLLFVHYSNGDESSDPGPQHRAQGP GPEPTLGPLTRLEGIKVGHERKVQLVTDRDHFIRTLSLKPLLFEIPGFLTDEECRLII HLAQMKGLQRSQILPTEEYEEAMSTMQVSQLDLFRLLDQNRDGHLQLREVLAQTRLGN GWWMTPESIQEMYAAIKADPDGDGVLSLQEFSNMDLRDFHKYMRSHKAESSELVRNSH HTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDSGPV YPETICSHTKLVANESVPFETSCRQVSPNWGLPSILRPGTPMTQAQPCTVGVPLGMGP GDHWVIPVSPWEHPQLGTCSVPPLPYSYMTVLFYLNNVTGGGETVFPVADNRTYDEMS LIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLVT RGTKWIANNWINVDPSRARQALFQQEMARLAREGGTDSQPEWALDRAYRDARVEL" BASE COUNT 410 a 589 c 583 g 348 t ORIGIN 1 gtgccatggc ggcagcggcg gtgacaggcc agcggcctga gaccgcggcg gccgaggagg 61 cctcgaggcc gcagtgggcg ccgccagacc actgccaggc tcaggcggcg gccgggctgg 121 gcgacggcga ggacgcaccg gtgcgtccgc tgtgcaagcc ccgcggcatc tgctcgcgcg 181 cctacttcct ggtgctgatg gtgttcgtgc acctgtacct gggtaacgtg ctggcgctgc 241 tgctcttcgt gcactacagc aacggcgacg aaagcagcga tcccgggccc caacaccgtg 301 cccagggccc cgggcccgag cccaccttag gtcccctcac ccggctggag ggcatcaagg 361 tggggcacga gcgtaaggtc cagctggtca ccgacaggga tcacttcatc cgaaccctca 421 gcctcaagcc gctgctcttc gaaatccccg gcttcctgac tgatgaagag tgtcggctca 481 tcatccatct ggcgcagatg aaggggttac agcgcagcca gatcctgcct actgaagagt 541 atgaagaggc aatgagcact atgcaggtca gccagctgga cctcttccgg ctgctggacc 601 agaaccgtga tgggcacctt cagctccgtg aggttctggc ccagactcgc ctgggaaatg 661 gatggtggat gactccagag agcattcagg agatgtacgc cgcgatcaag gctgaccctg 721 atggtgacgg agtgctgagt ctgcaggagt tctccaacat ggaccttcgg gacttccaca 781 agtacatgag gagccacaag gcagagtcca gtgagctggt gcggaacagc caccatacct 841 ggctctacca gggtgagggt gcccaccaca tcatgcgtgc catccgccag agggtgctgc 901 gcctcactcg cctgtcgcct gagatcgtgg agctcagcga gccgctgcag gttgttcgat 961 atggtgaggg gggccactac catgcccacg tggacagtgg gcctgtgtac ccagagacca 1021 tctgctccca taccaagctg gtagccaacg agtctgtacc cttcgagacc tcctgccggc 1081 aagtatctcc caactggggg ctgccttcaa tcctcagacc aggaacaccc atgacacagg 1141 cacagccctg cactgtgggc gtgccccttg gcatggggcc aggagatcac tgggttatcc 1201 cggtaagccc ctgggagcat ccacaactgg ggacctgctc agtgcccccc ctgccttaca 1261 gctacatgac agtgctgttt tatttgaaca acgtcactgg tgggggcgag actgttttcc 1321 ctgtagcaga taacagaacc tacgatgaaa tgagtctgat tcaggatgac gtggacctcc 1381 gtgacacacg gaggcactgt gacaagggaa acctgcgtgt caagccccaa cagggcacag 1441 cagtcttctg gtacaactac ctgcctgatg ggcaaggttg ggtgggtgac gtagacgact 1501 actcgctgca cgggggctgc ctggtcacgc gcggcaccaa gtggattgcc aacaactgga 1561 ttaatgtgga ccccagccga gcgcggcaag cgctgttcca acaggagatg gcccgccttg 1621 cccgagaagg gggcaccgac tcacagcccg agtgggctct ggaccgggcc taccgcgatg 1681 cgcgcgtgga actctgaggg aagagttagc cccggttccc agccgcgggt cgccagttgc 1741 ccaagatcag gggtccggct gtccttctgt cctgctgcag actaaaggtc tggccaatgt 1801 cttgccccac cccgccagcc gcgatacggc gcagttccta tattcatgtt atttattgtg 1861 tactgactcc atctgccccg tcaaataaaa aaccacaagg ttcgaaaaaa aaaaaaaaaa 1921 aaaaaaaaaa //