LOCUS BC011701 1736 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptonemal complex protein SC65, mRNA (cDNA clone
MGC:19699 IMAGE:3510378), complete cds.
ACCESSION BC011701
VERSION BC011701.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1736)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1736)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011701.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1736
/db_xref="H-InvDB:HIT000035385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19699 IMAGE:3510378"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1736
/gene="SC65"
/gene_synonym="NOL55"
/db_xref="GeneID:10609"
CDS 17..1330
/gene="SC65"
/gene_synonym="NOL55"
/codon_start=1
/product="synaptonemal complex protein SC65"
/protein_id="AAH11701.1"
/db_xref="GeneID:10609"
/translation="MARVAWGLLWLLLGSAGAQYEKYSFRGFPPEDLMPLAAAYGHAL
EQYEGESWRESARYLEAALRLHRLLRDSEAFCHANCSGPAPAAKPDPDGGRADEWACE
LRLFGRVLERAACLRRCKRTLPAFQVPYPPRQLLRDFQSRLPYQYLHYALFKANRLEK
AVAAAYTFLQRNPKHELTAKYLNYYQGMLDVADESLTDLEAQPYEAVFLRAVKLYNSG
DFRSSTEDMERALSEYLAVFARCLAGCEGAHEQVDFKDFYPAIADLFAESLQCKVDCE
ANLTPNVGGYFVDKFVATMYHYLQFAYYKLNDVRQAARSAASYMLFDPKDSVMQQNLV
YYRFHRARWGLEEEDFQPREEAMLYHNQTAELRELLEFTHMYLQSDDEMELEETEPPL
EPEDALSDAEFEGEGDYEEGMYADWWQEPDAKGDEAEAEPEPELA"
BASE COUNT 356 a 524 c 568 g 288 t
ORIGIN
1 cggcggcgcg gcgggcatgg ctcgggtggc gtgggggctg ctgtggttgc tgctgggcag
61 cgccggggcg cagtacgaga agtacagctt ccggggcttc ccgcccgagg acctgatgcc
121 gctggccgcg gcgtacgggc acgctctgga gcagtacgag ggagagagct ggcgcgagag
181 cgcgcgctac ctggaggcgg cgctgcggct gcaccggctc ctgcgcgaca gcgaggcctt
241 ctgccacgcc aactgcagcg gccccgcgcc cgcggccaag cccgatcccg acggcggccg
301 cgcagacgag tgggcctgcg agctgcggct cttcggccgc gtcctggagc gagccgcctg
361 cctgcggcgc tgcaagcgga cgctgcccgc cttccaggtg ccctacccgc cgcggcagct
421 gctgcgtgac ttccagagcc gcctgcccta ccagtacctg cactacgcgc tgttcaaggc
481 taaccggctg gagaaggcgg tggcggcggc ctacaccttc ctccagagga acccgaagca
541 cgagctgacc gccaagtatc tcaactacta tcaggggatg ctggacgtcg ccgacgagtc
601 cctcacggac ctagaggccc agccctacga ggccgtgttc ctccgggctg tgaagctcta
661 caacagcggg gatttccgca gcagcacgga ggacatggag cgggccttgt cagagtacct
721 ggcagtcttt gcccggtgcc tggccggctg tgaaggggcc catgagcagg tggacttcaa
781 ggacttctac ccggccatag cagatctctt tgcagagtcc ctgcagtgca aggtggactg
841 tgaggccaat ttgaccccca atgtgggtgg ctacttcgtg gacaagttcg tggccaccat
901 gtaccactac ctgcagtttg cctactataa gttgaatgat gtgcgccagg ctgcccgcag
961 cgccgccagc tacatgctct tcgaccccaa ggacagcgtc atgcagcaga acctggtgta
1021 ttaccggttc caccgggctc gctggggcct ggaagaggag gacttccagc cccgggagga
1081 ggccatgctc taccacaacc agaccgccga gctgcgggag ctgctggagt tcacccacat
1141 gtacctgcag tcagatgatg agatggagct ggaggagaca gaaccgcccc tggagcctga
1201 ggatgcccta tctgacgccg agtttgaggg ggagggtgac tacgaggagg gcatgtatgc
1261 tgactggtgg caggagccgg atgccaaggg tgacgaggcc gaggctgagc cagagcctga
1321 actcgcatga gaaggggaca ccccacaccc ctcaagcttg ggaagcctgg tgccgatggc
1381 cccaccctca ccagcctggg cagcagcaag aactatttat taaaaactta agatgggcca
1441 ggtgcggtgg ctcacacctg taatcccagc attttgggag gccaaggtgg gtggatcact
1501 tgaggccagg agttcaagac cagcctggcc aacatgatga gacctccgtc tctactaaaa
1561 tacataaatt agccgggtgt ggtggcaggc gcctgaaatc ccagctactc aagaggctga
1621 ggcaggagaa tcgcttgaac ctgggaggca aaggttgcag tgaactgaga ttgcgccacc
1681 gcactccagc ctgggcgaca gagcgagact ccatctttaa aaaaaaaaaa aaaaaa
//