LOCUS BC011681 1741 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting and assembly machinery component 50 homolog (S. cerevisiae), mRNA (cDNA clone MGC:19651 IMAGE:3010765), complete cds. ACCESSION BC011681 VERSION BC011681.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1741) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1741) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC011681.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: a Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1741 /db_xref="H-InvDB:HIT000035370" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19651 IMAGE:3010765" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1741 /gene="SAMM50" /gene_synonym="CGI-51" /gene_synonym="OMP85" /gene_synonym="SAM50" /gene_synonym="TOB55" /gene_synonym="TRG-3" /gene_synonym="YNL026W" /db_xref="GeneID:25813" /db_xref="HGNC:HGNC:24276" CDS 158..1567 /gene="SAMM50" /gene_synonym="CGI-51" /gene_synonym="OMP85" /gene_synonym="SAM50" /gene_synonym="TOB55" /gene_synonym="TRG-3" /gene_synonym="YNL026W" /codon_start=1 /product="sorting and assembly machinery component 50 homolog (S. cerevisiae)" /protein_id="AAH11681.1" /db_xref="GeneID:25813" /db_xref="HGNC:HGNC:24276" /translation="MGTVHARSLEPLPSSGPDFGGLGEEAEFVEVEPEAKQEILENKD VVVQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVL IDTCQGDDALPNGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVT FQFSYGTKETSYGLSFFKPRPGNFERNFSVNLYKVTGQFPWSSLRETDRGMSAEYSFP IWKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRG ALLKVNQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIA DRFYLGGPTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFR THFFLNAGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGV QTGDRICDGVQFGAGIRFL" BASE COUNT 456 a 406 c 465 g 414 t ORIGIN 1 cggggaatca tggccgcccc cagtgttccg cgtccggggg tttgtgggag ttgccttgac 61 ctgcagctcc gccaccgcgg acccgccttc tgccctcagc agcagacgct ctgtcccgcc 121 cgggcagctc tgcgaggcag cggctggaga gggaaccatg gggactgtgc acgcccggag 181 tttggagcct cttccatcaa gtggacctga ttttggagga ttaggagaag aagctgaatt 241 tgttgaagtt gagcctgaag ctaaacagga aattcttgaa aacaaagatg tggttgttca 301 acatgttcat tttgatggac ttggaaggac taaagatgat atcatcattt gtgaaattgg 361 agatgttttc aaggccaaaa acctaattga ggtaatgcgg aaatctcatg aagcccgtga 421 aaaattgctc cgtcttggaa tttttagaca agtggatgtt ttgattgaca catgtcaagg 481 tgatgacgca cttccaaatg ggttagacgt tacctttgaa gtaactgaat tgaggagatt 541 aacgggcagt tataacacca tggttggaaa caatgaaggc agtatggtac ttggcctcaa 601 gcttcctaat cttcttggtc gtgcagaaaa ggtgaccttt cagttttcct atggaacaaa 661 agaaacttcg tatggcctgt ccttcttcaa accacggccc ggaaacttcg aaagaaattt 721 ctctgtaaac ttatataaag ttactggaca gttcccttgg agctcactgc gggagacgga 781 cagaggaatg tcagctgagt acagttttcc catatggaag accagccaca ctgtcaagtg 841 ggaaggcgta tggcgagaac tgggctgcct ctcaaggacg gcgtcatttg ctgttcgaaa 901 agaaagcgga cattcactga aatcatctct ttcgcacgcc atggtcatcg attctcggaa 961 ttcttccatc ttaccaagga gaggtgcttt gctgaaagtt aaccaggaac tggcaggcta 1021 cactggcggg gatgtgagct tcatcaaaga agattttgaa cttcagttga acaagcaact 1081 catatttgat tcagtttttt cagcgtcttt ctggggcgga atgttggtac ccattggtga 1141 taagccgtca agcattgctg ataggtttta cctcggggga cccacaagcg tccgcggatt 1201 cagcatgcac agcatcgggc cacagagcga aggagactac ctaggtggag aagcgtactg 1261 ggccggcggc ctgcacctct acaccccatt acctttccgg ccaggccagg gtggctttgg 1321 agaacttttc cgaacacact tctttctcaa cgcaggaaac ctctgcaacc tcaactatgg 1381 ggagggcccc aaagctcata ttcgtaagct ggctgagtgc atccgctggt cgtacggggc 1441 cgggattgtc ctcaggcttg gcaacatcgc tcggttggaa cttaattact gcgtccccat 1501 gggagtacag acaggcgaca ggatatgtga tggcgtccag tttggagctg ggataaggtt 1561 cctgtagccg acacccctac aggagaagct ctgggactgg ggcagcagca aggcgcccat 1621 gccacacacc gtctctcgag gaaacgcggt tcagcgattc tttgactgcg gaccctgtgg 1681 gaaaccccgt caataaatgt taaagacaca ctccgaaaaa aaaaaaaaaa aaaaaaaaaa 1741 a //