LOCUS BC011652 3251 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens BMI1 polycomb ring finger oncogene, mRNA (cDNA clone
MGC:12685 IMAGE:4138748), complete cds.
ACCESSION BC011652
VERSION BC011652.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3251)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3251)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC011652.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725706.
FEATURES Location/Qualifiers
source 1..3251
/db_xref="H-InvDB:HIT000035351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12685 IMAGE:4138748"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3251
/gene="BMI1"
/gene_synonym="RNF51"
/db_xref="GeneID:648"
/db_xref="HGNC:HGNC:1066"
/db_xref="MIM:164831"
CDS 506..1486
/gene="BMI1"
/gene_synonym="RNF51"
/codon_start=1
/product="BMI1 polycomb ring finger oncogene"
/protein_id="AAH11652.1"
/db_xref="GeneID:648"
/db_xref="HGNC:HGNC:1066"
/db_xref="MIM:164831"
/translation="MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIV
RYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHP
SADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKSKEEVND
KRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRRN
GPLPLKYRVRPTCKRMKISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPS
TPVQSPHPQFPHISSTMNGTSNSPSGNHQSSFANRPRKSSVNGSSATSSG"
BASE COUNT 1008 a 593 c 676 g 974 t
ORIGIN
1 cagcaactat gaaataatcg tagtatgaga ggcagagatc ggggcgagac aatggggatg
61 tgggcgcggg agccccgttc cggcttagca gcacctccca gccccgcaga ataaaaccga
121 tcgcgccccc tccgcgcgcg ccctcccccg agtgcggagc gggaggaggc ggcggcggcc
181 gaggaggagg aggaggaggc cccggaggag gaggcgttgg aggtcgaggc ggaggcggag
241 gaggaggagg ccgaggcgcc ggaggaggcc gaggcgccgg agcaggagga ggccggccgg
301 aggcggcatg agacgagcgt ggcggccgcg gctgctcggg gccgcgctgg ttgcccattg
361 acagcggcgt ctgcagctcg cttcaagatg gccgcttggc tcgcattcat tttctgctga
421 acgactttta actttcattg tcttttccgc ccgcttcgat cgcctcgcgc cggctgctct
481 ttccgggatt ttttatcaag cagaaatgca tcgaacaacg agaatcaaga tcactgagct
541 aaatccccac ctgatgtgtg tgctttgtgg agggtacttc attgatgcca caaccataat
601 agaatgtcta cattccttct gtaaaacgtg tattgttcgt tacctggaga ccagcaagta
661 ttgtcctatt tgtgatgtcc aagttcacaa gaccagacca ctactgaata taaggtcaga
721 taaaactctc caagatattg tatacaaatt agttccaggg cttttcaaaa atgaaatgaa
781 gagaagaagg gatttttatg cagctcatcc ttctgctgat gctgccaatg gctctaatga
841 agatagagga gaggttgcag atgaagataa gagaattata actgatgatg agataataag
901 cttatccatt gaattctttg accagaacag attggatcgg aaagtaaaca aagacaaaga
961 gaaatctaag gaggaggtga atgataaaag atacttacga tgcccagcag caatgactgt
1021 gatgcactta agaaagtttc tcagaagtaa aatggacata cctaatactt tccagattga
1081 tgtcatgtat gaggaggaac ctttaaagga ttattataca ctaatggata ttgcctacat
1141 ttatacctgg agaaggaatg gtccacttcc attgaaatac agagttcgac ctacttgtaa
1201 aagaatgaag atcagtcacc agagagatgg actgacaaat gctggagaac tggaaagtga
1261 ctctgggagt gacaaggcca acagcccagc aggaggtatt ccctccacct cttcttgttt
1321 gcctagcccc agtactccag tgcagtctcc tcatccacag tttcctcaca tttccagtac
1381 tatgaatgga accagcaaca gccccagcgg taaccaccaa tcttcttttg ccaatagacc
1441 tcgaaaatca tcagtaaatg ggtcatcagc aacttcttct ggttgatacc tgagactgtt
1501 aaggaaaaaa attttaaacc cctgatttat atagatatct tcatgccatt acagctttct
1561 agatgctaat acatgtgact atcgtccaat ttgctttctt ttgtagtgac attaaatttg
1621 gctataaaag atggactaca tgtgatactc ctatggacgt taattgaaaa gaaagattgt
1681 tgttataaag aattggtttc ttggaaagca ggcaagactt tttctctgtg ttaggaaaga
1741 tgggaaatgg tttctgtaac cattgtttgg atttggaagt actctgcagt ggacataagc
1801 attgggccat agtttgttaa tctcaactaa cgcctacatt acattctcct tgatcgttct
1861 tgttattacg ctgttttgtg aacctgtaga aaacaagtgc tttttatctt gaaattcaac
1921 caacggaaag aatatgcata gaataatgca ttctatgtag ccatgtcact gtgaataacg
1981 atttcttgca tatttagcca ttttgattcc tgtttgattt atacttctct gttgctacgc
2041 aaaaccgatc aaagaaaagt gaacttcagt tttacaatct gtatgcctaa aagcgggtac
2101 taccgtttat tttactgact tgtttaaatg attcgctttt gtaagaatca gatggcatta
2161 tgcttgttgt acaatgccat attggtatat gacataacag gaaacagtat tgtatgatat
2221 atttataaat gctataaaga aatattgtgt ttcatgcatt cagaaatgat tgttaaaatt
2281 ctcccaactg gttcgacctt tgcagatacc cataacctat gttgagcctt gcttaccagc
2341 aaagaatatt tttaatgtgg atatctaatt ctaaagtctg ttccattaga agcaattggc
2401 acatctttct atactttata tacttttctc cagtaataca tgtttacttt aaaaattgtt
2461 gcagtgaaga aaaaccttta actgagaaat atggaaaccg tcttaatttt ccattggcta
2521 tgatggaatt aatattgtat tttaaaaatg catattgatc actataattc taaaacaatt
2581 ttttaaataa accagcaggt tgctaaaaga aggcatttta tctaaagtta ttttaatagg
2641 tggtatagca gtaattttaa atttaagagt tgcttttaca gttaacaatg gaatatgcct
2701 tctctgctat gtctgaaaat agaagctatt tattatgagc ttctacaggt atttttaaat
2761 agagcaagca tgttgaattt aaaatatgaa taaccccacc caacaatttt cagtttattt
2821 tttgctttgg tcgaacttgg tgtgtgttca tcacccatca gttatttgtg agggtgttta
2881 ttctatatga atattgtttc atgtttgtat gggaaaattg tagctaaaca tttcattgtc
2941 cccagtctgc aaaagaagca caattctatt gctttgtctt gcttatagtc attaaatcat
3001 tacttttaca tatattgctg ttacttctgc tttctttaaa aatatagtaa aggatgtttt
3061 atgaagtcac aagatacata tatttttatt ttgacctaaa tttgtacagt cccattgtaa
3121 gtgttgtttc taattataga tgtaaaatga aatttcattt gtaattggaa aaaatccaat
3181 aaaaaggata ttcatttaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaaaa a
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