LOCUS BC011642 1406 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens paired-like homeodomain 3, mRNA (cDNA clone MGC:12766
IMAGE:4131442), complete cds.
ACCESSION BC011642
VERSION BC011642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1406)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1406)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24234713.
FEATURES Location/Qualifiers
source 1..1406
/db_xref="H-InvDB:HIT000035348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12766 IMAGE:4131442"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1406
/gene="PITX3"
/gene_synonym="PTX3"
/db_xref="GeneID:5309"
/db_xref="HGNC:HGNC:9006"
/db_xref="MIM:602669"
CDS 154..1062
/gene="PITX3"
/gene_synonym="PTX3"
/codon_start=1
/product="paired-like homeodomain 3"
/protein_id="AAH11642.1"
/db_xref="GeneID:5309"
/db_xref="HGNC:HGNC:9006"
/db_xref="MIM:602669"
/translation="MEFGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKA
SASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLT
EARVRVWFKNRRAKWRKRERSQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKA
LAPPLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAPGTVPGPGALQGL
GGGPPGLAPAAVSSGAVSCPYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHAS
FSYPAVHGPPPAANLSPCQYAVERPV"
BASE COUNT 237 a 529 c 438 g 202 t
ORIGIN
1 gagcgcccga gcggagaggc ggcccgggag caggggggcg gcccccactc cggccgggtg
61 cccggcccct ggcccctgcc tgccctctag atcgccgccg cagccgccgc tactgggagt
121 ctgcctgttg caggacgcac tagccctccc tccatggagt tcggcctgct cagcgaggca
181 gaggcccgga gccctgccct gtcgctgtca gacgctggca ctccgcaccc ccagctccca
241 gagcacggct gcaagggcca ggagcacagc gactcagaaa aggcctcggc ttcgctgccc
301 ggcggctccc cagaggacgg ttcgctgaaa aagaagcagc ggcggcagcg cacgcacttc
361 accagccagc agctacagga gctagaggcg accttccaga ggaaccgcta ccccgacatg
421 agcacgcgcg aggagattgc cgtgtggacc aacctcaccg aggcccgcgt gcgggtgtgg
481 ttcaagaacc ggcgcgccaa atggcggaag cgcgagcgca gccagcaggc cgagctatgc
541 aaaggcagct tcgcggcgcc gctcgggggg ctggtgccgc cctacgagga ggtgtacccc
601 ggctactcgt acggcaactg gccgcccaag gctcttgccc cgccgctcgc cgccaagacc
661 tttccattcg ccttcaactc ggtcaacgtg gggcctctgg cttcgcagcc cgtcttctcg
721 ccacccagct ccatcgccgc ctccatggtg ccctccgccg cggctgcccc gggcaccgtg
781 ccagggcctg gggccctgca gggcctgggc gggggccccc ccgggctggc tccggccgcc
841 gtgtcctccg gggccgtgtc ctgcccttat gcctcggccg ccgccgccgc cgcggctgcc
901 gcctcttccc cctacgtcta tcgggacccg tgtaactcga gcctggccag cctgcggctc
961 aaagccaaac agcacgcctc cttcagctac cccgctgtgc acgggccgcc cccggcagcc
1021 aaccttagtc cgtgccagta cgccgtggaa aggcccgtat gagcggcccc gcccgtagat
1081 catccccgag ggcgggggca acgattcaca gcctccgcgg actggggtca ttttgactgg
1141 cttgctcccg ccccagggtc tgaaaggggt gtttgggcag ctggggggca ccggctcagg
1201 agagggcctt cccctcccag ccctgagggg tggactaggc cctacacaca gaccgcgccc
1261 ctgggactaa agccaggaac agggaccagc tccccggggg ccaactcacc cttggcccat
1321 cccgccttct ccaggcttcc cctccctcgt tttcaaagat aaatgaaata aacgtgcgcg
1381 gactgtcaaa aaaaaaaaaa aaaaaa
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