LOCUS BC011602 2389 bp mRNA linear HUM 04-NOV-2003 DEFINITION Homo sapiens RecQ protein-like 4, mRNA (cDNA clone IMAGE:3139122), partial cds. ACCESSION BC011602 VERSION BC011602.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2389) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2389) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 28, 2003 this sequence version replaced BC011602.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: c Column: 2. FEATURES Location/Qualifiers source 1..2389 /db_xref="H-InvDB:HIT000087669" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3139122" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2389 /gene="RECQL4" /gene_synonym="RECQ4" /gene_synonym="RTS" /db_xref="GeneID:9401" /db_xref="MIM:603780" CDS <1..2228 /gene="RECQL4" /gene_synonym="RECQ4" /gene_synonym="RTS" /codon_start=3 /product="RECQL4 protein" /protein_id="AAH11602.2" /db_xref="GeneID:9401" /db_xref="MIM:603780" /translation="EVFQALEQLGHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLC YQLPALLYSRRSPCLTLVVSPLLSLMDDQVSGLPPCLKAACIHSGMTRKQRESVLQKI RAAQVHVLMLTPEALVGAGGLPPAAQLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKV LRERMGVHCFLGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTD QALLTLLQGKRFQNLDSIIIYCNRREDTERIAALLRTCLHAAWVPGSGGRAPKTTAEA YHAGMCSRERRRVQRAFMQGQLRVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQA VGRAGRDGQPAHCHLFLQPQGEDLRELRRHVHADSTDFLAVKRLVQRVFPACTCTCTR PPSEQEGAVGGERPVPKYPPQEAEQLSHQAAPGPRRVCMGHERALPIQLTVQALDMPE EAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLP EDPGQGSSSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSEL AFHLRSPGDLTAEEKDQICDFLYGRVQARERQALARLRRTFQAFHSVAFPSCGPCLEQ QDEERSTRLKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSL RPEEKFSSRAVARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQVA R" misc_feature 12..458 /gene="RECQL4" /gene_synonym="RECQ4" /gene_synonym="RTS" /note="DEAD; Region: DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression" /db_xref="CDD:pfam00270" misc_feature 654..1052 /gene="RECQL4" /gene_synonym="RECQ4" /gene_synonym="RTS" /note="HELICc; Region: Helicase superfamily c-terminal domain" /db_xref="CDD:cd00079" BASE COUNT 442 a 762 c 772 g 413 t ORIGIN 1 ctgaggtgtt ccaggccctg gagcagctgg ggcaccaagc ctttcgccct gggcaggagc 61 gtgcagtcat gcggatcctg tctggcatct ccacgctgct ggtgctgcct acaggtgccg 121 gcaagtccct gtgctaccag ctcccagcgc tgctctacag ccggcgcagc ccctgcctca 181 cgttggtcgt ctctcccctg ctgtcactca tggatgacca ggtgtctggc ctgccaccgt 241 gtctcaaggc ggcctgcata cactcgggca tgaccaggaa gcaacgggaa tctgtcctgc 301 agaagattcg ggcagcccag gtacacgtgc tgatgctgac acctgaggca ctggtggggg 361 cgggaggcct ccctccagcc gcacagctgc ctccagttgc ttttgcctgc attgatgagg 421 cccactgcct ctcccagtgg tcccacaact tccggccctg ctacctgcgc gtctgcaagg 481 tgcttcggga gcgcatgggc gtgcactgct tcctgggcct cacagccaca gccacacgcc 541 gcactgccag tgacgtggca cagcacctgg ctgtggctga agagcctgac ctccacgggc 601 cagccccagt tcccaccaac ctgcaccttt ccgtgtccat ggacagggac acagaccagg 661 cactgttgac gctgctgcaa ggcaaacgtt ttcaaaacct cgattccatt atcatttact 721 gcaaccggcg cgaggacaca gagcggatcg ctgcgctcct ccgaacctgc ctgcacgcag 781 cctgggtccc agggtctgga ggtcgtgccc ccaaaaccac agccgaggcc taccacgcgg 841 gcatgtgcag ccgggaacgg cggcgggtac agcgagcctt catgcagggc cagttgcggg 901 tggtggtggc cacggtggcc tttgggatgg ggctggaccg gccagatgtg cgggctgtgc 961 tgcatctggg gctgccccca agcttcgaga gctacgtgca ggccgtgggc cgggccgggc 1021 gtgacgggca gcctgcccac tgccacctct tcctgcagcc ccagggcgaa gacctgcgag 1081 agctgcgcag acatgtgcac gccgacagca cggacttcct ggctgtgaag aggctggtac 1141 agcgcgtgtt cccagcctgc acctgcacct gcaccaggcc gccctcggag caggaagggg 1201 ccgtgggtgg ggagaggcct gtgcccaagt acccccctca agaggctgag cagcttagcc 1261 accaagcagc cccaggaccc agaagggtct gcatgggcca tgagcgggca ctcccaatac 1321 agcttaccgt acaggctttg gacatgccgg aggaggccat cgagactttg ctgtgctacc 1381 tggagctgca cccacaccac tggctggagc tgctggcgac cacctatacc cattgccgtc 1441 tgaactgccc tgggggccct gcccagctcc aggccctggc ccacaggtgt ccccctttgg 1501 ctgtgtgctt ggcccagcag ctgcctgagg acccagggca aggcagcagc tccgtggagt 1561 ttgacatggt caagctggtg gactccatgg gctgggagct ggcctctgtg cggcgggctc 1621 tctgccagct gcagtgggac cacgagccca ggacaggtgt gcggcgtggg acaggggtgc 1681 ttgtggagtt cagtgagctg gccttccacc ttcgcagccc gggggacctg accgctgagg 1741 agaaggacca gatatgtgac ttcctctatg gccgtgtgca ggcccgggag cgccaggccc 1801 tggcccgtct gcgcagaacc ttccaggcct ttcacagcgt agccttcccc agctgcgggc 1861 cctgcctgga gcagcaggat gaggagcgca gcaccaggct caaggacctg ctcggccgct 1921 actttgagga agaggaaggg caggagccgg gaggcatgga ggacgcacag ggccccgagc 1981 cagggcaggc cagactccag gattgggagg accaggtccg ctgcgacatc cgccagttcc 2041 tgtccctgag gccagaggag aagttctcca gcagggctgt ggcccgcatc ttccacggca 2101 tcggaagccc ctgctacccg gcccaggtgt acgggcagga ccgacgcttc tggagaaaat 2161 acctgcacct gagcttccat gccctggtgg gcctggccac ggaagagctc ctgcaggtgg 2221 cccgctgact gcactgcatt gggggatgtc gggtagagct ggggttgtca gaggctaggg 2281 cagtgactga ggacctgggc aaaacctgcc acagggtgtg ggaacgagga ggctccaaaa 2341 tgcagaataa aaaatgctca ctttgttttt aaaaaaaaaa aaaaaaaaa //