LOCUS BC011599 2841 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tuftelin interacting protein 11, mRNA (cDNA clone
MGC:1355 IMAGE:3051032), complete cds.
ACCESSION BC011599
VERSION BC011599.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011599.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56788354.
FEATURES Location/Qualifiers
source 1..2841
/db_xref="H-InvDB:HIT000035319"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1355 IMAGE:3051032"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2841
/gene="TFIP11"
/gene_synonym="bK445C9.6"
/gene_synonym="TIP39"
/db_xref="GeneID:24144"
/db_xref="HGNC:HGNC:17165"
CDS 228..2741
/gene="TFIP11"
/gene_synonym="bK445C9.6"
/gene_synonym="TIP39"
/codon_start=1
/product="tuftelin interacting protein 11"
/protein_id="AAH11599.1"
/db_xref="GeneID:24144"
/db_xref="HGNC:HGNC:17165"
/translation="MSLSHLYRDGEGRIDDDDDERENFEITDWDLQNEFNPNRQRHWQ
TKEEATYGVWAERDSDDERPSFGGKRARDYSAPVNFISAGLKKGAAEEAELEDSDDEE
KPVKQDDFPKDFGPRKLKTGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKM
GYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSMQDFPVVDSEEEAEEEF
QKELSQWRKDPSGSKKKPKYSYKTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQ
KVYYSYSQISHKHNVPDDGLPLQSQQLPQSGKEAKAPGFALPELEHNLQLLIDLTEQE
IIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEECERRMQPDCS
NPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLKDCTYGTE
IISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVRNIVTQWQPRNCDPMVDFL
DSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQARLEPL
YSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGELV
INPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKW
YLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR
KDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETKAEEHNIVFMPVIGKRHEG
KQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK"
BASE COUNT 764 a 716 c 793 g 568 t
ORIGIN
1 gcgtcttctc gcgcggatgg tgaagctgaa tttggtacgc tggaccctcg gacagacagc
61 aagagagaga caagcccgag gcctgacttc tagcactcct gagtttgagc cctatgagca
121 gtggaaccta gggaccacca aggatccaga tataattctt tcctcagtaa tagaaaaaag
181 aatctgggat ctaagaagat acctactcat tttctaagtg actggccatg tcattgtccc
241 acttataccg ggatggggaa ggccgcattg atgatgatga tgacgagcgg gagaactttg
301 agatcactga ctgggatctc cagaatgagt tcaaccccaa ccgacagcgc cactggcaga
361 ccaaggaaga agccacctac ggggtgtggg cagagcgaga ctcggatgat gagaggccca
421 gctttggagg caaacgggcc cgtgactact ctgcgccagt caacttcatc agcgcagggc
481 tcaagaaagg ggcagcggag gaggcagagt tggaagattc tgatgacgaa gagaaacctg
541 ttaagcagga cgactttcct aaggattttg gaccaaggaa gctaaaaacg ggtggcaatt
601 ttaagcccag ccagaaaggt tttgcaggag gaaccaaatc tttcatggac ttcggcagct
661 gggaaagaca cacaaaagga attggacaga agcttcttca gaagatgggc tacgtccctg
721 gacggggcct cgggaagaat gcacaaggta tcattaaccc aattgaagcc aagcagagaa
781 agggaaaagg tgctgtgggg gcttatggat ccgagcgcac cactcagtcc atgcaagact
841 tccctgtggt tgactcagag gaagaagctg aagaggagtt tcagaaggag ctgagccagt
901 ggaggaaaga cccaagtgga agcaagaaga agcccaaata ctcttacaag accgtggaag
961 agttgaaggc caagggcagg attagcaaga agctcactgc tccccagaag gaactttctc
1021 aagtcaaggt catagacatg acaggccggg agcagaaggt ctactacagc tacagtcaga
1081 tcagccacaa gcacaacgtt cccgatgatg ggctgccgct acagtcccaa cagctgccac
1141 agtctggcaa agaggccaag gcccccggct tcgcgctgcc cgagctggag cacaacctgc
1201 agctgctcat cgacctcacg gagcaggaga tcatccagaa tgaccggcag ctacagtatg
1261 agcgggacat ggtggtcaac ctcttccacg agctggagaa gatgaccgag gtcctggacc
1321 acgaggagcg ggtcatctcg aacctcagca aggtcctgga gatggtggag gagtgcgagc
1381 ggcggatgca gcccgactgc agcaaccccc tcaccctgga cgagtgtgcc cgcatcttcg
1441 aaaccctgca ggacaagtac tatgaggagt acaggatgtc cgaccgtgtg gaccttgctg
1501 tggccatcgt ctatccactc atgaaggagt acttcaagga gtgggatccc ctcaaagact
1561 gcacttatgg caccgagatc atctctaagt ggaaaagcct cctagagaat gaccagctct
1621 tgtcccatgg cggacaggac ctctcagcag atgcctttca caggttgata tgggaagtct
1681 ggatgccttt tgttcgaaat attgtcaccc agtggcagcc aaggaactgt gacccgatgg
1741 tggacttttt ggatagttgg gtgcacatta ttcctgtgtg gatcttagat aacatactgg
1801 accaactcat cttccccaag ctgcaaaagg aggtggaaaa ctggaacccg ctcacagaca
1861 ctgttcccat ccactcttgg atccacccat ggctgcccct tatgcaggca cggctggagc
1921 cactctattc ccccatccgt agtaagctgt ccagcgccct gcagaagtgg caccccagcg
1981 actcctctgc caagctcatc ctccagccct ggaaggatgt cttcactcct ggctcctggg
2041 aagcattcat ggtcaaaaac atagtgccca agctggggat gtgtcttggt gagctagtca
2101 ttaaccccca ccagcagcac atggatgcat tctattgggt gattgactgg gaagggatga
2161 tctctgtctc tagcctggtg ggacttcttg aaaagcactt cttccccaag tggcttcagg
2221 tgctgtgctc ttggctcagt aacagcccaa attatgagga gatcaccaag tggtacctgg
2281 gttggaagtc gatgttctca gaccaagtgc tggcacatcc atctgtcaag gacaaattta
2341 atgaggcact tgatatcatg aaccgggcgg tgtcctccaa cgttggtgcc tacatgcagc
2401 caggagcacg ggagaacatt gcctatctca cccacacgga gcggaggaag gacttccagt
2461 acgaggccat gcaggagagg cgggaggctg agaacatggc tcagaggggc attggcgtgg
2521 ccgctagctc tgtgcccatg aactttaagg acctcattga gaccaaggct gaggagcaca
2581 acattgtctt catgcccgtc attgggaagc gacacgaagg gaagcagctc tacacctttg
2641 gccgcattgt gatctacatt gaccggggag tggtctttgt ccagggcgag aagacgtggg
2701 tgcccacctc actgcagagc ctgatcgaca tggccaagtg aactgtggca ggtccagaac
2761 cagtcagaga cttgccccta agagggatgt actgtaaata aacagtattt ttagatcacc
2821 ttcaaaaaaa aaaaaaaaaa a
//