LOCUS BC011579 1554 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens transmembrane protein 222, mRNA (cDNA clone
IMAGE:4548544), partial cds.
ACCESSION BC011579
VERSION BC011579.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149778.
FEATURES Location/Qualifiers
source 1..1554
/db_xref="H-InvDB:HIT000035304"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4548544"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1554
/gene="TMEM222"
/gene_synonym="RP11-4K3__A.4"
/db_xref="GeneID:84065"
/db_xref="HGNC:HGNC:25363"
CDS <1..577
/gene="TMEM222"
/gene_synonym="RP11-4K3__A.4"
/codon_start=2
/product="TMEM222 protein"
/protein_id="AAH11579.2"
/db_xref="GeneID:84065"
/db_xref="HGNC:HGNC:25363"
/translation="PPRMAEVEAPTAAETDMKQYQGSGGVAMDVERSRFPYCVVWTPI
PVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKYWKLDPAQVYASGPN
AWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGK
YVSVGAFVKTWLPFILLLGIILTVSLVFNLR"
BASE COUNT 310 a 487 c 433 g 324 t
ORIGIN
1 cccgcccagg atggcggaag tggaggcgcc gacggcggcc gagacggaca tgaagcaata
61 tcaaggctcc ggcggcgtcg ccatggatgt ggaacggagt cgcttcccct actgcgtggt
121 gtggacgccc atcccggtgc tcacgtggtt tttccccatc atcggccaca tgggcatctg
181 cacatccaca ggagtcattc gggacttcgc gggcccctac tttgtctcag aggacaacat
241 ggcctttgga aagcctgcca agtactggaa gttggaccct gctcaggtct atgctagcgg
301 gcccaacgca tgggacacgg ctgtgcacga cgcctctgag gagtacaagc accgcatgca
361 caatctctgc tgtgacaact gccactcgca cgtggcattg gccctgaatc tgatgcgcta
421 caacaacagc accaactgga atatggtgac gctctgcttc ttctgcctgc tctacgggaa
481 gtacgtcagc gttggggcct tcgtgaagac ctggctgccc ttcatccttc tcctgggcat
541 catcctcacc gtcagcctgg tctttaacct ccggtgatgg ctgctcggtg gccccacacc
601 caccagggtc ccgaggaaac agccgccatc ccttttggtt ccagattttt ttctcctcac
661 cccaaaaggc agggttgggc ctgctgttgt ggaccggggg tcggggctgg caggatggaa
721 ggactgagga ccagcatgaa gtgggggttt gttgtctccc tgcctctcag aagcaccctg
781 tcccctcctc cccaggcctg tgactccggc cctggaagcc cctttgttct tctgttgaaa
841 ggctttggct tccctctgta gagctgctcc cgccaccacc tgctggggtc ctgcctcagc
901 ccagtgccca gtatggggag aggaggacat ttgggctcac ctgtcaaggt ggccctggga
961 ccagagctgg tcccagcatg gggtgcaccg ggtacactta acgtgtctct ataagccaag
1021 ttgcttcagg accttcacca ctggcctcta gaatggtcca gaggggctgg ctgggtccct
1081 ttgtcagact cctgccggca gctgccctgg gggacatgtg tgcccatctg gcatcctcca
1141 gcccgtgcag tccgctcttc actgttccac ggcctcccag tgcctcccag cattggaccc
1201 atctccccct gcagtttgag gccagagagg tgagtggacc tgacaagtgc cagagtaacc
1261 gtgtagacag agcagtgtag acagcgctca gccccagccc caggtgtgga cctcatgctg
1321 gtgatggctc ccctgggtgg cctgccagca cagccagtgc catcagggag ctgaaggggc
1381 tgtcccccac ctaactccag ctcccccttc acgttgtcac caaggccctg tgccgcccgc
1441 ctcgcccccc tgctctgtgg attcctttgg gaagggctcc ctgggcagga caataaagag
1501 ttttgactcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//