LOCUS BC011577 3344 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 97, mRNA (cDNA clone
MGC:20255 IMAGE:4651484), complete cds.
ACCESSION BC011577
VERSION BC011577.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16418350.
FEATURES Location/Qualifiers
source 1..3344
/db_xref="H-InvDB:HIT000035302"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20255 IMAGE:4651484"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3344
/gene="CCDC97"
/gene_synonym="FLJ40267"
/gene_synonym="MGC20255"
/db_xref="GeneID:90324"
/db_xref="HGNC:HGNC:28289"
CDS 123..1154
/gene="CCDC97"
/gene_synonym="FLJ40267"
/gene_synonym="MGC20255"
/codon_start=1
/product="coiled-coil domain containing 97"
/protein_id="AAH11577.1"
/db_xref="GeneID:90324"
/db_xref="HGNC:HGNC:28289"
/translation="MEAVATATAAKEPDKGCIEPGPGHWGELSRTPVPSKPQDKVEAA
EATPVALDSDTSGAENAAVSAMLHAVAASRLPVCSQQQGEPDLTEHEKVAILAQLYHE
KPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYA
ALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELSARTPTHQPPKPGSPGRPAC
PLSNLLLQSYEERELQQRLLQQQEEEEACLEEEEEEEDSDEEDQRSGKDSEAWVPDSE
ERLILREEFTSRMHQRFLDGKDGDFDYSTVDDNPDFDNLDIVARDEEERYFDEEEPED
APSPELDGD"
BASE COUNT 677 a 1068 c 919 g 680 t
ORIGIN
1 gcctgggcgc agcggtgcac ccggacccgg aacattctca ggcgaaagtg tctcttgcgt
61 gcgtgggccg gaggttagtg tgcggggccc gccgggcggt tgaaaagtcc gagagaatca
121 ggatggaggc cgtggcgacg gcgacggcgg cgaaggaacc cgataagggc tgcatagagc
181 ctggacctgg gcactggggt gagctgagcc ggacaccagt cccatctaaa ccccaggaca
241 aagtggaagc agctgaggca acaccagtgg ccctggacag tgacacctcc ggggctgaaa
301 atgcagcagt gagtgctatg ctgcacgctg tagccgccag ccgcctgcct gtttgcagcc
361 agcagcaggg tgaacccgac ttgacagagc atgagaaagt ggccatcctg gcccagctgt
421 accacgagaa gccactggtg ttcctggagc gcttccgcac aggcctccgt gaggagcatc
481 tggcctgctt tggccacgtg cgtggcgacc accgtgcaga cttctactgt gctgaggtgg
541 cccggcaggg cactgcccgg ccccgcaccc tgcgtacccg cctgcgtaac cggcgctatg
601 ctgccctgcg agagctgatc caagggggcg agtacttcag tgatgagcag atgcggttcc
661 gggcccccct gctatatgag cagtacatcg ggcagtatct cacccaggag gagctcagtg
721 cccgcacccc aacccaccag ccccccaagc ccgggtcccc cgggagacct gcttgcccgc
781 tctccaactt gctgctccag tcctacgagg agcgggagct acagcagcgt ctgctccaac
841 agcaggagga ggaggaggcc tgcttggagg aagaggaaga ggaggaggac agtgacgagg
901 aagaccagag gtcaggcaag gactcggagg cctgggttcc cgactcggag gagaggctga
961 tcctgcgaga ggagttcacc agccgcatgc accagcgctt cctagatggc aaggacgggg
1021 actttgacta cagcacagta gacgacaacc ccgacttcga caacctcgac atcgtggcac
1081 gggatgagga ggagaggtac tttgatgagg aagaacctga ggatgcgccc agcccagagc
1141 tggatgggga ctgatggccg ccacccttcc caccgcctgc cccatcccca tccccaacaa
1201 ggcagctgat tccaggcctg ctcagtgacc ctttctctag ggggacatca gggcagtgcc
1261 ccacaaccca cacacaccac catctcactg ggtctagtct catctcagac aacccccacc
1321 cccactgttt ctggggttcc ctttctcatc tctcccaccc tgtctcctgc ctctgtcttt
1381 cttggtgtct gtctgggctt ctttctgtct ctttctgtct ttctgtctct ctccctaccc
1441 ccgctccctc tttccagtgc tctggctggc tgtctctccc tttctccccc tctctctctg
1501 ccttaggctc tgtctccacc gcagggccca aggtgaaagt cctccccttg ccggaggcca
1561 gctggcaggg cctttcgtgg ctggaagtgg ccagtttggt tccggtgctg acccctaggc
1621 cccagcgcag ctgcctcccg tgctgtctgt ctccccctct ctgtttatgt ctgcgctgtg
1681 tctcacactc agagcctcct tgcttctgtt aggttcccat ctctccttct gcctcactct
1741 gggcctcttc tttctacttg tacatttcca cctctctagg cctctgctct cactgtccct
1801 ctctgtctgt ctctcagcct ttatctctgg gttttgatcc cccactccag gctctgggcc
1861 ccttcttccc ccttccctca aacctggctg ctataggcag cagaaccctg accactgagt
1921 aatacagccc caggggaggg aggagacccc aggcagggag gatgggggca gctctcttct
1981 ctccccagga cccaggctgt ggatcacggg gcctgccagc ttgagtgtag agggaggggg
2041 gactctaccc ttctcagccc caccagcccc cctctgccca accacaattt tcccttcctc
2101 cgccttcctc tccctctcct gtttacactc cccaaatgcg cacaggctgt tatcatgggt
2161 cctgagtcat cccacacaca gcctgcccca gcgtccctgc ccccagctgg ccgcagggcc
2221 cgccccatgg agccccctgc cgccctgggc taatgggagc cagatggccg cctggtgact
2281 cagccaccgg gcctgtggga acccaggcgt cccgccttcc catgccccca cacccggctc
2341 ctgctccccc agcagacaca cacaggaggg cctggccact gttgaggggg cacacagggc
2401 aagggtcacc aagtcggggc ctagggactc ctcatgcctc tgagatggaa tggtggtatc
2461 ctgccgtggc caagcctgaa ggaccctcaa aactgcctcc tggagtccac ggttcctgac
2521 ctccgagcct cagctatgcc ctctgggtca accagaatta gagccagaca gggaaagtga
2581 gagctggatg gaggcagaca agatgctcag agcgactatt aaagaacgaa agcctctgct
2641 acggagcgct tctgtcctct gtcaggcccg agcgaagtgc ctgacaccgg gttggatcct
2701 cagatggccc catgaactag tgaagtgggt caaaggaggc ctggaaagat gttgcttcct
2761 caaggccact cggccatcag aggcagaaat gaaacaggaa cccaggccta gaatcacaaa
2821 ggtcctagaa accacttggc tgtctggcct ctcaggtgtc agggccatcc agagtgagac
2881 agcattggag ggacaagtgt gcatgcagat gtcctcagac gggaaggttt gagaagggtc
2941 agatggtagg cgggcctaac aagggctccg tgctagccac tgtcccgcac acagacagga
3001 tcaggtcatc ttgatatgga gatcagtccc caaatcactg aattgtccca gcagtgctat
3061 gccctaggta ctaccaatat cactcctcta tttcccagag gaggaagcag cagctagact
3121 ccaggacctt ggggtcatat ctctcagaaa gccaagagtg caggatgaga gctgtctgtc
3181 tcttacctgc ctgtatttgt gccccatttt taaagagcag agggcctggg ccacaggaaa
3241 ggtatcagcc cttggtgata ggcacatttt ttaccagtct atcatttggt cattaaattt
3301 gtttacaata tactttgcta taaaaaaaaa aaaaaaaaaa aaaa
//