LOCUS BC011565 2104 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cytochrome b-245, alpha polypeptide, mRNA (cDNA clone
IMAGE:4563468), with apparent retained intron.
ACCESSION BC011565
VERSION BC011565.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68509913
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2104
/db_xref="H-InvDB:HIT000087660"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4563468"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 408 a 636 c 704 g 356 t
ORIGIN
1 cagtgtccca gccgggttcg tgtcgccatg gggcagatcg agtgggccat gtgggccaac
61 gagcaggcgc tggcgtccgg cctgagtgag tgcacgtcag ggacggtgga ggctgcagcc
121 tggaggggtg tcccaagacc ccagccggga cctcgggcta cttacagggt ggggaagtgg
181 ggcgccaggc gggccaggcc gggccggggt caggccagga gggtgcgggg aacgggggcg
241 ggaccctcag gccgcgggct ggaaggagga gttctgagac ccccagtaat tcccttgcag
301 accctgcgga gcgcggcgcc cctcccccat tcccttctct cggtcccccg actccgcgaa
361 ggaggaagtt gcagtgcagg ggaagaggcg gttcagcccc ggtggtttcc ggggtcaccg
421 ccccgaagcc cccgagtggg ggctccggcc tgggcatcgg gagaagctcc cctgcccctc
481 ggtagccagc tggcctggag gtcgctctcc ctgggcttgg ggtggggaat gggctcatgc
541 cctggggctc agcccttctc atctggagtc tgcgctggag gcggtctgag atttcacaag
601 gcgccgaaac cacccagtga cggccctgcc cagcccagct gcacaggcac tttgctcttg
661 gggtgggatg gcacagcccc cagtcaccct cctgtgcatt tgctcagagg ttctggtgag
721 ggcagcggac tccatttgga aatggaccct ctcgggacca gggccaggga gtgtctggcc
781 cagcacgggt gaggctgggc tcaggcgagg tctgagggca gaggcaccac tgcagcagct
841 ccaggaagga cctgcaccgg gggaggagtg cctgggaagg gcctgggggc tgagggtgag
901 gaggaggggc ccgccgccac cactcccctg gggctctgag cgccctccct gttgtctgga
961 gggtgcgtgg cagctggagt gggagcagag acctcagggt gggagggctg gaggacgggg
1021 ccctgcagcc tgtcctgtgc ccaggaaagt gacctcctgc ttcgagtcag cggccaagaa
1081 gtcggtgggt cagttcagac agctcttccc agagctgccc cgtgagactc accctgcctg
1141 ccccgcactc cctacaggaa gtagacggac tgagggcacc cagctgggag ccaggagacc
1201 tgggctctag tctggcctcc tgctgaaacc ctccaggggc tcctggcccg aagagttaga
1261 gccagactgg acgccctgca ctgcccgccc tggcctcccg gctctccggc cccctcctcc
1321 agctgccgtg cttcctttct gttcctagat ctcctgagcg tgccccaggg cctcggcaca
1381 agctgctgct tctgcagagc ctcatggctg tctcatttat ttctcaattc aaatgccacc
1441 tgcctgggga ggtccttcca gaccgtgcag ccccaggagg cagctggccc ggagacagca
1501 gggccttgac aaagagtccc ccctgtacac agcaggtgct ctgtaaatgt ggctgggtgc
1561 cagaatacgt cctcagacct ccctggtggc accagcggca gctttgcacc ctctttcgga
1621 tggcaggctc gggaccagga cggtccccaa agatgcatgg acaattggct gagtagactc
1681 aaggacactg ccctcccctc ctccgacgca gacagacaaa cccagagagt taatgtgtag
1741 ctgggctcaa accaaggata ggaaatcttc caacaagacc atgtggagac aaaaacagaa
1801 tggctggcag ggcaaggtgg ctacacctgt aatcctagca ctttgggagg ccaaggcggg
1861 cggatcacga ggtcaggaga tcgagaccat cctggctaac acagtgaaac cccgtctcta
1921 ctaaaaatac aaaaaattag ccgggtatgg tggcaggcgc gcatagtccc agctactcgg
1981 gaggctgagg caggagaatc gcttcaacct gggaggtgga ggttgtagtg agctgagatc
2041 acgccacgga actccagcct gggtgacagg gcaagactct gtctccaaaa aaaaaaaaaa
2101 aaaa
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