LOCUS BC011543 1139 bp mRNA linear HUM 06-JAN-2005
DEFINITION Homo sapiens FIP1 like 1 (S. cerevisiae), mRNA (cDNA clone
IMAGE:3874821), partial cds.
ACCESSION BC011543
VERSION BC011543.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1139)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1139)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 24
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..1139
/db_xref="H-InvDB:HIT000087656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3874821"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1139
/gene="FIP1L1"
/gene_synonym="DKFZp586K0717"
/gene_synonym="Rhe"
/db_xref="GeneID:81608"
/db_xref="MIM:607686"
CDS <1..989
/gene="FIP1L1"
/gene_synonym="DKFZp586K0717"
/gene_synonym="Rhe"
/codon_start=3
/product="FIP1L1 protein"
/protein_id="AAH11543.1"
/db_xref="GeneID:81608"
/db_xref="MIM:607686"
/translation="GLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLRRL
PGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTH
LPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPY
GNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRDRDRERERTRE
RERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHK
SSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEATPAE"
BASE COUNT 367 a 260 c 261 g 251 t
ORIGIN
1 ctgggcttcc accgagcaga aacagcactt cttctcagtc tcagacaagt actgcctcca
61 gaaaagccaa ttcaagcgtt gggaagtggc aggatcgata tgggagggcc gaatcacctg
121 atctaaggag attacctggg gcaattgatg ttatcggtca gactataact atcagccgag
181 tagaaggcag gcgacgggca aatgagaaca gcaacataca ggtcctttct gaaagatctg
241 ctactgaagt agacaacaat tttagcaaac cacctccgtt tttccctcca ggagctcctc
301 ccactcacct tccacctcct ccatttcttc cacctcctcc gactgtcagc actgctccac
361 ctctgattcc accaccgggt tttcctcctc caccaggcgc tccacctcca tctcttatac
421 caacaataga aagtggacat tcctctggtt atgatagtcg ttctgcacgt gcatttccat
481 atggcaatgt tgcctttccc catcttcctg gttctgctcc ttcgtggcct agtcttgtgg
541 acaccagcaa gcagtgggac tattatgcca gaagagagaa agaccgagat agagagagag
601 acagagacag agagcgagac cgtgatcggg acagagaaag agaacgcacc agagagagag
661 agagggagcg tgatcacagt cctacaccaa gtgttttcaa cagcgatgaa gaacgataca
721 gatacaggga atatgcagaa agaggttatg agcgtcacag agcaagtcga gaaaaagaag
781 aacgacatag agaaagacga cacagggaga aagaggaaac cagacataag tcttctcgaa
841 gtaatagtag acgtcgccat gaaagtgaag aaggagatag tcacaggaga cacaaacaca
901 aaaaatctaa aagaagcaaa gaaggaaaag aagcgggcag tgagcctgcc cctgaacagg
961 agagcaccga agctacacct gcagaatagg catggttttg gccttttgtg tatattagta
1021 ccagaagtag atactataaa tcttgttatt tttctggata atgtttaaga aatttacctt
1081 aaatcttgtt ctgtttgtta gtatgaaaag ttaacttttt ttccaaaaaa aaaaaaaaa
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