LOCUS BC011534 3755 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens enhancer of mRNA decapping 3 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:9943 IMAGE:3875364), complete cds.
ACCESSION BC011534
VERSION BC011534.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3755)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3755)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923612.
FEATURES Location/Qualifiers
source 1..3755
/db_xref="H-InvDB:HIT000035272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9943 IMAGE:3875364"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3755
/gene="EDC3"
/gene_synonym="FLJ21128"
/db_xref="GeneID:80153"
/db_xref="HGNC:HGNC:26114"
/db_xref="MIM:609842"
CDS 159..1685
/gene="EDC3"
/gene_synonym="FLJ21128"
/codon_start=1
/product="enhancer of mRNA decapping 3 homolog (S.
cerevisiae)"
/protein_id="AAH11534.1"
/db_xref="GeneID:80153"
/db_xref="HGNC:HGNC:26114"
/db_xref="MIM:609842"
/translation="MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNG
VKCLVPEVTFRAGDITELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGK
FVKKPASSSSAPQNIPKRTDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHN
SWSSSSRHPNQATPKKSGLKNGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAV
FEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSG
LVVPSISYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQR
PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ
VSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVHEVE
QGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA
"
BASE COUNT 828 a 1003 c 1013 g 911 t
ORIGIN
1 ggcgcttccg gcagcggcgg cggtggtgaa ggccgatgct gtgggggtgg gcgtggagag
61 aattcttctg tgggtcctct ggtgttgagt ggtcggcttg gtgtggtgtg cggaggagct
121 ccaggcccgt cggcgcggag tggtctcacg tgtgaaacat ggctacagat tggctgggaa
181 gtattgtgtc catcaattgt ggagatagct tgggtgtcta tcagggaaga gtgtcagctg
241 tggatcaggt cagccagacc atttctctca cccggccttt ccataatgga gtgaagtgtc
301 ttgttccaga agtcaccttc agggcaggtg acattacgga gttaaaaatt ctggagatac
361 caggacctgg agacaaccaa cattttggag accttcatca aacagaatta ggcccctctg
421 gtgctggctg ccaagtgggc atcaatcaga atggcacagg caagtttgtc aagaagccag
481 cctcttccag cagtgcccct cagaatatcc ctaagaggac agatgtgaag agccaggatg
541 ttgccgtttc cccgcagcag caacagtgct caaagagcta tgtcgacagg cacatggaat
601 ccttgagtca gtccaaaagt ttccgtcgtc ggcacaactc ctggtcatct agtagcaggc
661 acccaaatca ggcaactccc aagaaaagtg gtttaaagaa tggccagatg aagaataaag
721 atgacgagtg cttcggggat gatattgagg agatcccaga cacagatttt gattttgaag
781 ggaacctggc tctttttgac aaggcagctg tgtttgagga gattgatacc tatgaaagga
841 gaagtggtac ccgttcccgg ggcatcccaa atgaaaggcc cactcggtac cgccatgatg
901 agaacatctt ggagtccgag cccattgtct atcgacggat catagtgccc cacaacgtga
961 gcaaggagtt ctgcacggac tctggcctgg ttgtcccaag tatttcctat gagctgcata
1021 aaaagctgtt gtccgtggct gagaagcatg ggctgaccct tgagcggaga ctggagatga
1081 caggtgtgtg tgccagtcag atggcactga ccctcctcgg aggacctaac aggttgaatc
1141 ccaaaaatgt tcaccagagg cctacagtgg ctctactgtg tggacctcat gtgaaggggg
1201 ctcagggtat cagctgtgga aggcacctag ccaaccatga tgtccaggtc atccttttcc
1261 tgcccaattt tgtcaagatg ttggaatcta tcaccaatga gctgtcgctc ttcagcaaga
1321 cccaaggcca acaagtgtct agcctcaaag atctgcccac tagccctgtg gacctggtca
1381 tcaactgcct ggattgccct gagaacgtct tcctgcgcga tcaaccctgg tacaaggcag
1441 ctgtggcctg ggccaaccag aaccgggcac cagtactcag catagaccct cctgtgcatg
1501 aagtcgaaca gggcattgat gccaaatggt cactggcact gggcctgcct ctgccactgg
1561 gggagcacgc aggccgtatc tatttgtgcg acattggcat tccccagcag gtcttccagg
1621 aggtgggcat caactaccac tcgccctttg gctgcaagtt tgttatccca ctgcactctg
1681 cttagagggt tcctgcgcag gcaggactct gctgtcccct gctgctcctg ataacaaacg
1741 ccttaaggat atgaagcttc atggaccttg ttaaagtttt ttctcttttg ggtttgtttc
1801 ttctgtgaga gaacagaact tacttaaaac tgacctgtca cttgctctta gccagggaag
1861 tctttcccac tgggttccgg gctgggtggc aggctgagcg tgcagcaact ccaggcatct
1921 ctaccctcag ccccctgcac ggccaggtgg gcctttgttt acagccgtag gcagctctca
1981 agactgtgtt tcaggtttac agccactggg cctgggcaca cacattgaag agtgggccag
2041 gtcctgtctg ggggcctgta cctgctctat ttcagagctt gtggctttgt gtctcccctg
2101 ctttccccac gcagacagcc cttcctctgt agaaccagct gcacggcagc tgtccaccag
2161 agggcagacc tgcactctcc attcatgtcc agggctgtga cagaccaggc cttcccctag
2221 ccccacaagt tgatttgggg ggttttgacc cttactcctg agctgatcca agttttatgc
2281 tgatttttcc aaggatctct ccctcctttt ccctccatca ctcagaggta gggaaggggg
2341 cggcattagg atggtgttac tgtattggga ttttatgttg ttctgtcgtc ttcagcacag
2401 gtagtataag gttatattac tgtagaacca cagtgcccat cttgccagca gtgcccgccc
2461 ccaccctcaa agctgagcag gttgagcctt tgcctagtct ggggccagac ccctcagatg
2521 gggatatccc tgggggagcc tggtgctgaa ccagaagagg cttcctggtg cttctgtcct
2581 aggccaccac tcctccagcc ctttgcccgc acatacatgc cccacctact ctttcatccc
2641 ctctgccctt cccctgaaac ggtcctttgc agctgtcatc ccagagcagg cagatgggct
2701 cccgtgcttg agctccaccc cagctcttac atcatctggg ctttgaacct tttacatttg
2761 tccagtctag atgagtaggc ttggggccag caccctgtct caaagatggc aaaatgaggc
2821 tagttctgga tgagctagct ggtgtgggtt ccaaccatag gaacacactg atgctcaaat
2881 cctaaggtgc caagctctag gccctggagg ctggtagaac aggatctatg cctggaatcc
2941 tggcagggat tcctgtcaag gacttgtgtt taagcctgct tcagggcttc aggctgcttc
3001 tgctctgtgt ctgcccaggc tggctgagcg ggtggatggg tggacagaag ggctcaccaa
3061 ggattgtgga catagggtag gccctggtac cacgggtttc aggctgttat cacttccctt
3121 gtaggaacat agccagaagc agatgagcca gggtagaggg ctggcccctc ctctcatctt
3181 cccttcagtc ttaaattgtc tccagcgatg ggaagaggcc agggactgta acccttgtgc
3241 tgtgtattct ctgagcctct gctcactctc agggccaagc agctcccaag ccggggccct
3301 ctcttggcca aaatctgagg agcagtctag gttacaggct ttttggtagg taggttctgg
3361 ctgcctgtta atgcagttag gccccctgat taggtacagt gagaaacaag ctagaacaac
3421 cctggcccag aagactgtcc actccagcaa gatccaggga tgatagcctt gcagggccac
3481 tgggagtttg tgcccaagct tctccctctt ctctccccag ggggcactgg gactggtccc
3541 tgccctcatc cttagcctgg gccttcccca gaggtattaa agagaagtat gattcctctg
3601 tcttcagttc ttttcagggg catcctgccc atagtaccca gttcccaagg ggcccccagt
3661 cacgtggtga agcctagcac tcatgcagct cttagggaac caaaaaccag cactgaaata
3721 aagctgaatg actgactgaa aaaaaaaaaa aaaaa
//