LOCUS BC011515 1662 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens tafazzin, mRNA (cDNA clone
MGC:17101 IMAGE:4339983), complete cds.
ACCESSION BC011515
VERSION BC011515.1
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 1662)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1662)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317264.
FEATURES Location/Qualifiers
source 1..1662
/db_xref="H-InvDB:HIT000035263"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lymph, lymphoma"
/db_xref="taxon:32630"
/clone="MGC:17101 IMAGE:4339983"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1662
/gene="TAZ"
/gene_synonym="BTHS"
/gene_synonym="G4.5"
/gene_synonym="LVNCX"
/gene_synonym="Taz1"
/gene_synonym="XAP-2"
/db_xref="GeneID:6901"
/db_xref="HGNC:HGNC:11577"
/db_xref="MIM:300394"
CDS 98..886
/gene="TAZ"
/gene_synonym="BTHS"
/gene_synonym="G4.5"
/gene_synonym="LVNCX"
/gene_synonym="Taz1"
/gene_synonym="XAP-2"
/codon_start=1
/transl_table=11
/product="TAZ protein"
/protein_id="AAH11515.1"
/db_xref="GeneID:6901"
/db_xref="HGNC:HGNC:11577"
/db_xref="MIM:300394"
/translation="MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTSEWAQAEA
GPPGYPCPAGGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVPVCRGDGV
YQKGMDFILEKLNHGDWVHIFPEGIGRLIAECHLNPIILPLWHVGEPGDGDREMASGV
GGLGLPLVPGCPAPPHVWPSVHCAAGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPV
LERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR"
BASE COUNT 355 a 493 c 478 g 336 t
ORIGIN
1 actagttcta gatcgcgagc ggccgaggtc gcagacctag aggcgcccca caggccggcc
61 cggggcgctg ggagcgccgg ccgcgggccg ggtggggatg cctctgcacg tgaagtggcc
121 gttccccgcg gtgccgccgc tcacctggac cctggccagc agcgtcgtca tgggcttggt
181 gggcacctac agctgcttct ggaccagtga gtgggcccag gccgaggcag gcccgcccgg
241 gtacccatgc ccggccggag ggatcctgaa actccgccac atctggaacc tgaagttgat
301 gcgttggacc cctgcagctg cagacatctg cttcaccaag gagctacact cccacttctt
361 cagcttgggc aagtgtgtgc ctgtgtgccg aggagatggc gtctaccaga aggggatgga
421 cttcattttg gagaagctca accatgggga ctgggtgcat atcttcccag aaggaatcgg
481 gcgcctgatt gctgagtgtc atctcaaccc catcatcctg cccctgtggc atgtcggtga
541 gcctggggac ggggacagag agatggcatc tggggtgggg ggcctgggac tccctctggt
601 cccaggctgc cctgctccac cccacgtctg gccttctgtc cactgtgctg caggaatgaa
661 tgacgtcctt cctaacagtc cgccctactt cccccgcttt ggacagaaaa tcactgtgct
721 gatcgggaag cccttcagtg ccctgcctgt actcgagcgg ctccgggcgg agaacaagtc
781 ggctgtggag atgcggaaag ccctgacgga cttcattcaa gaggaattcc agcatctgaa
841 gactcaggca gagcagctcc acaaccacct ccagcctggg agataggcct tgcttgctgc
901 cttctggatt cttggcccgc acagagctgg ggctgaggga tggactgatg cttttagctc
961 aaacgtggct tttagacaga tttgttcata gaccctctca agtgccctct ccgagctggt
1021 aggcattcca gctcctccgt gcttcctcag ttacacaaag gacctcagct gcttctccca
1081 cttggccaag cagggaggaa gaagcttagg cagggctctc tttccttctt gccttcagat
1141 gttctctccc aggggctggc ttcaggaggg agcatagaag gcaggtgagc aaccagttgg
1201 ctaggggagc agggggccca ccagagctgt ggagagggga ccctaagact cctcggcctg
1261 gctcctaccc accgcccttg ccgaaccagg agctgctcac tacctcctca gggatggccg
1321 ttggccacgt cttccttctg cctgagcttc ccccccacca caggcccttt cctcaggcaa
1381 ggtctggcct caggtgggcc gcaggcggga aaagcagccc ttggccagaa gtcaagccca
1441 gccacgtgga gcctagagtg agggcctgag gtctggctgc ttgcccccat gctggcgcca
1501 acaacttctc catcctttct gcctctcaac atcacttgaa tcctagggcc tgggttttca
1561 tgtttttgaa acagaaccat aaagcatatg tgttggcttg ttgtaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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