LOCUS BC011483 3835 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome X open reading frame 57, mRNA (cDNA clone
MGC:17498 IMAGE:3453700), complete cds.
ACCESSION BC011483
VERSION BC011483.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3835)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3835)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: j Column: 1.
FEATURES Location/Qualifiers
source 1..3835
/db_xref="H-InvDB:HIT000258944"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17498 IMAGE:3453700"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3835
/gene="CXorf57"
/gene_synonym="FLJ10178"
/gene_synonym="FLJ14191"
/gene_synonym="RP11-647M7.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
CDS 73..2640
/gene="CXorf57"
/gene_synonym="FLJ10178"
/gene_synonym="FLJ14191"
/gene_synonym="RP11-647M7.1"
/codon_start=1
/product="chromosome X open reading frame 57"
/protein_id="AAH11483.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
/translation="MSGESGQPEAGPSHAGLDWPNPERNRAGVPGGVIRRAGSQGPRS
WIQKVLEQIMDSPRQCVTPSEVVPVTVLAVQRYLLEDEPRDTVPEPPLYCYDVTISDG
VYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLYNEKRIGQGILCIDNVHCGETSD
SISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEEHNFSDTKI
ISLSHLEMTWTNRRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSV
IMWNALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRD
PPTNIIIIPEKQVKPEWRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKK
KENREDFWSYRWIHIADGTSEQPFIVELFSTSQPEIFENIYPMAYFVCTQLKVVRNDN
QVPKLLYLTTTNESGVFITGHRGQPYTYDAKVKNFIQWIRTKSDSGEQKNMVIGGYYP
YPPVPETFSKYSSSIKVESLLTAISEVRKEIEDLQYREQKRIAIQGIITAIKYIPHSS
ATESASASETLRNANRPSTSQAARVEIQERNGKRHQDDEPVNSQYFQTTSTNLSLSNK
IRILQGPHANPVAVPQPGASVQTKGIKPGMPSIFNRRANINANLQGKARKTISDRWES
QLWREKKFGLIDHLHYSRVYPESIPRKFMFEHRKFLSDQYNSQPAKYVPPEGRPPKLD
DFKSARSLGHFEVTILGLNHEIAIDVAFLPMYCPEDIRTSQIDTLLTSMNYSCAYPQD
TTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNKVEVYLHKIYSPENTS"
BASE COUNT 1182 a 719 c 804 g 1130 t
ORIGIN
1 gttttatttc tctccgcttt ggacggggca aactagcttt tgggagtgaa gcgggtacgc
61 agttatccaa caatgtctgg tgagtcagga cagcctgagg ctggtccctc acatgcaggg
121 ctagattggc cgaaccctga gaggaatcgg gctggggtcc cgggaggggt gatccgaaga
181 gctggttccc aagggcccag gtcctggatc caaaaggttc ttgagcagat tatggactca
241 cctcgccagt gtgtcacccc ctcggaggtg gtgcctgtaa ctgtgctggc cgtccagagg
301 tacctgttag aggatgagcc acgcgacacg gtgcccgagc ctccccttta ttgctatgat
361 gtgacgatct cagatggggt gtaccaggag aagtgctacc tggaccccag cttgaactct
421 ctcgtatatc aaaatattct taaagttggc attcaaatga gaatttccag ggtctcatgt
481 ctttacaatg agaaaaggat aggccagggg atcctgtgca tagataacgt ccactgtggg
541 gagacttcag acagtatttc tttagaaact cccttcagaa atagagcgca ccaggagaaa
601 ccagagaggc ctttaagagg cgggaagagt cattacctgg cgctgtggaa taacgaagat
661 ccctatggag atatctggtt aacagacaag caacctgagg aacacaactt tagcgatacc
721 aaaataattt ccctttctca tcttgaaatg acctggacta acagaagaaa ttttcctgca
781 ttgcttgtga ggatcttaca taaatcaaaa ctgcgatact atggaaaacc tgataaaaag
841 atgattgaac catatcagac ctttttggaa gttgctgaca gttcaggcac agtgtcagtg
901 attatgtgga atgccctgtg tcctgagtgg tataaaagtt tgcgggttgg tttagttctt
961 ctgcttcaag actattctgt taaaaagagt tatccattca gaatacagcc tgtccccgtg
1021 gatccacaga tcaaactaat ttctacaatg gaaatctgcc tgaatcttcg agatccccca
1081 acaaatataa ttatcattcc agaaaagcag gtgaaaccag aatggagact gccaaagcta
1141 aatcaccgat ttaccacaag gtcagaactg gatgatatgc cagaaaattg catctgtgat
1201 gttattggcc ttttagtttt tgtaggaagg gtccagcggt caaaaaagaa agaaaaccgt
1261 gaagattttt ggtcatatcg ctggattcac attgctgacg gtacttcaga acaaccattt
1321 atagtggaac tgttttcaac atcgcagcca gaaatctttg aaaatattta cccaatggca
1381 tattttgtgt gtacacagtt gaaagttgtc agaaatgaca atcaagtacc taagctgctt
1441 tacctcacca ctacaaatga gagtggagtg tttattactg gtcatagagg ccagccgtat
1501 acgtatgatg ccaaggtaaa aaactttatt caatggatta gaacaaagtc tgattccggg
1561 gaacagaaga atatggttat tggtggatat tacccctatc caccagtgcc agagacattt
1621 tccaagtata gtagttctat taaagttgag tcgctcttga cagctataag tgaagtcagg
1681 aaggagattg aagacttgca gtatagggaa caaaagcgca ttgcaattca ggggataatt
1741 actgctataa agtatatccc ccatagcagt gcgactgaaa gtgcctcagc atcagaaaca
1801 cttcggaatg ctaacagacc ctcgacctct caagcagcta gagtagaaat tcaagaaaga
1861 aatggtaaac ggcatcaaga tgatgagcct gtgaattctc agtatttcca aactacatct
1921 acaaatttaa gtctgagcaa taaaataaga attcttcaag gcccacacgc taatccagtt
1981 gctgtacctc aaccaggagc ttctgtacaa acaaagggaa ttaaaccggg catgccaagc
2041 atcttcaacc gtcgagcaaa tataaatgct aatctgcaag ggaaagccag aaaaactata
2101 agtgataggt gggagagtca gctgtggaga gagaaaaagt ttggcttaat agatcaccta
2161 cactacagcc gtgtttatcc tgaaagtatt ccacggaaat ttatgtttga acacagaaag
2221 tttcttagtg accagtataa ttctcagcct gcgaaatatg taccaccaga aggaaggccc
2281 ccaaaacttg atgattttaa gagcgcccga agccttggac attttgaagt aaccatacta
2341 ggtctgaacc atgagatagc aatcgatgtt gctttcctac ccatgtattg tccagaagat
2401 attcgaacat ctcaaataga cacactgttg acctccatga attacagctg tgcatatcca
2461 caggacacaa ctggaaatga ccgattgcca ggtccaagag cggttgcagg tgatattata
2521 aaagcagcaa ctgaactgga tagagtgcat atcgtcggta tcttggatat ctgtaatttg
2581 ggtaataata aagtggaagt ctatttgcac aagatttata gtccagagaa tacttcttaa
2641 aagttagcaa atgaaattat tacagattat acgagtgtac tgctttaaag atattccatc
2701 attttgctgg taatttcagt aactgttttc agcaagaata ttacatgagc tctaaagtta
2761 ttaagcagtt ttatgttcgt tttgtgttta gggagctttt taaaacactt catttcagat
2821 tcattattga aaaaggtcat caaaataatt tttgtgtata agggaattta ccttgcttac
2881 cttactagta tgactattat cttgacttct ggtaatttat gttcactatt ccatttgtga
2941 agtgtacttt cattctaaag cctcagtata aggcatccta acttacaaga gtaactttcc
3001 atggacattt aacatccttc caattttatt cacatataat gggaaatttt gaattgccag
3061 tttgaagact gttctcctaa agtgttcaac ctgcacttct tacaaccaag gtagtttgta
3121 tcattttcaa aagtacacat tattagggtc tagttgcccc tggtccttag cttgctcagc
3181 tgcaaaataa gcgtgctaaa ttaaattgtc ttaaggtttt tccacttcat tttgtgactt
3241 tgtgtggttc gaatttctca gtattttaac cagtgtgttg atgttaaagt caaaggctgc
3301 agtatgtcta tattcttgct gtactcattg gtagtttcag tatatgtaat gtgagtttaa
3361 atagtgaaat tgtatctcat attaacattt caaatgctca tattgaaaat ggaaaatagt
3421 aaacacggga attgatttta ttctggttgt ctataatact tcattttaaa tgtaaatggc
3481 cactctgcat ttgcaaggcc cggtggttga catctgtgtg gtttgttaga tgagacaaaa
3541 tgaccattaa atgagtttat agattattct gtatcaagat aaatctgatt ccagttaagc
3601 tataaacttg tgggattttc ttgtagccct atagttctgt gacttcattt gctatacgct
3661 ttaaatgtgt tgagcagcct atgaacctaa agacatactg cagtttgttc ataaatgtat
3721 tcagtctttt attctttata attgtgtgta aatgttaact aaacagtgga ttcctctcgt
3781 gttacagttt tgagtgaatt attaaagaag ttaaaatgca aaaaaaaaaa aaaaa
//