LOCUS BC011396 2327 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens pseudouridylate synthase 7 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:17720 IMAGE:3870711), complete cds.
ACCESSION BC011396
VERSION BC011396.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2327)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2327)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50727001.
FEATURES Location/Qualifiers
source 1..2327
/db_xref="H-InvDB:HIT000035239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17720 IMAGE:3870711"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2327
/gene="PUS7"
/db_xref="GeneID:54517"
/db_xref="HGNC:HGNC:26033"
CDS 196..2181
/gene="PUS7"
/codon_start=1
/product="pseudouridylate synthase 7 homolog (S.
cerevisiae)"
/protein_id="AAH11396.2"
/db_xref="GeneID:54517"
/db_xref="HGNC:HGNC:26033"
/translation="MEMTEMTGVSLKRGALVVEDNDSGVPVEETKKQKLSECSLTKGQ
DGLQNDFLSISEDVPRPPDTVSTGKGGKNSEAQLEDEEEEEEDGLSEECEEEESESFA
DMMKHGLTEADVGITKFVSSHQGFSGILKERYSDFVVHEIGKDGRISHLNDLSIPVDE
EDPSEDIFTVLTAEEKQRLEELQLFKNKETSVAIEVIEDTKEKRTIIHQAIKSLFPGL
ETKTEDREGKKYIVAYHAAGKKALANPRKHSWPKSRGSYCHFVLYKENKDTMDAINVL
SKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNP
LKLGELQGNHFTVVLRNITGTDDQVQQAMNSLKEIGFINYYGMQRFGTTAVPTYQVGR
AILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAKTKDPTAALRKLPVKRCVEGQLLR
GLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEDYGLKPVPGDLVLKG
ATATYIEEDDVNNYSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDIDNMRHKIR
DYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRALK
MDFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR"
BASE COUNT 746 a 488 c 534 g 559 t
ORIGIN
1 cggctggagc gcatctggtc ctccgcgcgg aaagcgctgc ttttgcctgg ccgccctagc
61 cgctggctca tccaagtggc cttcgccgct ctcttgcgtc ccaaccagag cgctggccac
121 ctcgccgccc agctcacgcc gcgcccgcgc tcccaggctc cgggttttct taaatgtttt
181 cttggagcct taaagatgga gatgacagaa atgactggtg tgtcgctgaa acgtggggca
241 ctggttgtcg aagataatga cagtggagtc ccagttgaag agacaaaaaa acagaagctg
301 tcggaatgca gcctaaccaa aggtcaagat gggctacaga atgactttct gtccatcagt
361 gaagacgtgc ctcggcctcc tgacactgtc agtactggga aaggtggaaa gaattctgag
421 gctcagttgg aagatgagga agaagaggag gaagatggac tttcagagga gtgcgaggag
481 gaggaatcag agagttttgc agacatgatg aagcatggac tcactgaggc tgacgtaggc
541 atcaccaagt ttgtgagttc tcatcaaggg ttctcgggaa tcttaaaaga aagatactcc
601 gacttcgttg ttcatgaaat aggaaaagat ggacggatca gccatttgaa tgacttgtcc
661 attccagtgg atgaggagga cccttcagaa gacatattta cagttttgac agctgaagaa
721 aagcagcgat tggaagagct ccagctgttc aaaaataagg aaaccagtgt tgccattgag
781 gttatcgagg acaccaaaga gaaaagaacc atcatccatc aggctatcaa atctctgttt
841 ccaggattag agacaaaaac agaggatagg gaggggaaga aatacattgt agcctaccac
901 gcagctggga aaaaggcttt ggcaaatcca agaaaacatt cttggccaaa atctagggga
961 agttactgcc acttcgtact atataaggaa aacaaagaca ccatggatgc tattaatgta
1021 ctctccaaat acttaagagt caagccaaat atattctcct acatgggaac caaagataaa
1081 agggctataa cagttcaaga aattgctgtt ctcaaaataa ctgcacaaag acttgcccac
1141 ctgaataagt gcttgatgaa ctttaagcta gggaatttca gctatcaaaa aaacccactg
1201 aaattgggag agcttcaagg aaaccacttc actgttgttc tcagaaatat aacaggaact
1261 gatgaccaag tacagcaagc tatgaactct ctcaaggaga ttggatttat taactactat
1321 ggaatgcaaa gatttggaac cacagctgtc cctacgtatc aggttggaag agctatacta
1381 caaaattcct ggacagaagt catggattta atattgaaac cccgctctgg agctgaaaag
1441 ggctacttgg ttaaatgcag agaagaatgg gcaaagacca aagacccaac tgctgccctc
1501 agaaaactac ctgtcaaaag gtgtgtggaa gggcagctgc ttcgaggact ttcaaaatat
1561 ggaatgaaga atatagtctc tgcatttggc ataataccca gaaataatcg cttaatgtat
1621 attcatagct accaaagcta tgtgtggaat aacatggtaa gcaagaggat agaagactat
1681 ggactaaaac ctgttccagg ggacctcgtt ctcaaaggag ccacagccac ctatattgag
1741 gaagatgatg ttaataatta ctctatccat gatgtggtaa tgcccttgcc tggtttcgat
1801 gttatctacc caaagcataa aattcaagaa gcctacaggg aaatgctcac agctgacaat
1861 cttgatattg acaacatgag acacaaaatt cgagattatt ccttgtcagg ggcctaccga
1921 aagatcatta ttcgtcctca gaatgttagc tgggaagtcg ttgcatatga tgatcccaaa
1981 attccacttt tcaacacaga tgtggacaac ctagaaggga agacaccacc agtttttgct
2041 tctgaaggca aatacagggc tctgaaaatg gatttttctc tacccccttc tacttacgcc
2101 accatggcca ttcgagaagt gctaaaaatg gataccagta tcaagaacca gacgcagctg
2161 aatacaacct ggcttcgctg agcagtacct tgtccacaga ttagaaaacg tacacaagtg
2221 tttgcttcct ggctccctgt gcatttttgt cttagttcag actcatatat ggatttcaaa
2281 tctttgtaat aaaaattatt tgtattttta agaaaaaaaa aaaaaaa
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