LOCUS BC011392 2430 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens 3'-phosphoadenosine 5'-phosphosulfate synthase 1, mRNA (cDNA clone MGC:9898 IMAGE:3869484), complete cds. ACCESSION BC011392 VERSION BC011392.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2430) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2430) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: i Column: 18. FEATURES Location/Qualifiers source 1..2430 /db_xref="H-InvDB:HIT000035236" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9898 IMAGE:3869484" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2430 /gene="PAPSS1" /gene_synonym="ATPSK1" /gene_synonym="PAPSS" /gene_synonym="SK1" /db_xref="GeneID:9061" /db_xref="MIM:603262" CDS 21..1832 /gene="PAPSS1" /gene_synonym="ATPSK1" /gene_synonym="PAPSS" /gene_synonym="SK1" /codon_start=1 /product="PAPSS1 protein" /protein_id="AAH11392.1" /db_xref="GeneID:9061" /db_xref="MIM:603262" /translation="MQRATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGK TTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADA GLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGE IKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVPVDASYEVKELYV PENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL DGGVINLSVPIVLTATHEDKERLDGCTAFALMYEGRRVAILRNPEFFEHRKEERCARQ WGTTCKNHPYIKMVMEQGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNAD AVFAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKDDDVPLMWRMKQ HAAVLEEGVLNPETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPH PETGKDLYEPSHGAKVLTMAPGLITLEIVPFRVAAYNKKKKRMDYYDSEHHEDFEFIS GTRMRKLAREGQKPPEGFMAPKAWTVLTEYYKSLEKA" misc_feature 108..584 /gene="PAPSS1" /gene_synonym="ATPSK1" /gene_synonym="PAPSS" /gene_synonym="SK1" /note="APS_kinase; Region: Adenylylsulfate kinase. Enzyme that catalyses the phosphorylation of adenylylsulfate to 3'-phosphoadenylylsulfate. This domain contains an ATP binding P-loop motif" /db_xref="CDD:pfam01583" misc_feature 837..1820 /gene="PAPSS1" /gene_synonym="ATPSK1" /gene_synonym="PAPSS" /gene_synonym="SK1" /note="ATP-sulfurylase; Region: ATP-sulfurylase. This family consists of ATP-sulfurylase or sulfate adenylyltransferase EC:2.7.7.4 some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase pfam01583. Both enzymes are required for PAPS (phosphoadenosine-phosphosulfate) synthesis from inorganic sulphate. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulfate APS from ATP and inorganic sulphate" /db_xref="CDD:pfam01747" BASE COUNT 688 a 475 c 567 g 700 t ORIGIN 1 ataacgcgca gaactgggga atgcagagag caaccaatgt cacctaccaa gcccatcatg 61 tcagcaggaa caagagaggt caggtggtgg ggaccagagg tggctttcgt ggttgcacag 121 tttggctaac aggcttgtct ggagcgggaa agactactgt gagcatggcc ttggaggagt 181 acctggtttg tcatggtatt ccatgctaca ctctggatgg tgacaatatt cgtcaaggtc 241 tcaataaaaa tcttggcttt agtcctgaag acagagaaga gaatgttcga cgcatcgcag 301 aagttgctaa actgtttgca gatgctggct tagtgtgcat cacaagtttc atatcacctt 361 acactcagga tcgcaacaat gcaaggcaaa ttcatgaagg tgcaagttta ccgttttttg 421 aagtatttgt tgatgctcct ctgcatgttt gtgaacagag ggatgtcaaa ggactctaca 481 aaaaagcccg ggcaggagaa attaaaggtt tcactgggat cgattctgaa tatgaaaagc 541 cagaggcccc tgagttggtg ctgaaaacag actcctgtga tgtaaatgac tgtgtccagc 601 aagttgtgga acttctacag gaacgggata ttgtacctgt ggatgcatct tatgaagtaa 661 aagaactata tgtgccagaa aataaacttc atttggcaaa aacagatgcg gaaacattac 721 cagcactgaa aattaataaa gtggatatgc agtgggtgca ggttttggca gaaggttggg 781 caaccccatt gaatggcttt atgagagaga gggagtactt gcagtgcctt cattttgatt 841 gtcttctgga tggaggtgtc attaacttgt cagtacctat agttctgact gcgactcatg 901 aagataaaga gaggctggac ggctgtacag catttgctct gatgtatgag ggccgccgtg 961 tggccattct tcgcaatcca gagttttttg agcacaggaa agaggagcgc tgtgccagac 1021 agtggggaac gacatgcaag aaccacccct atattaagat ggtgatggaa caaggagatt 1081 ggctgattgg aggagatctt caagtcttgg atcgagttta ttggaatgat ggtcttgatc 1141 agtatcgtct tactcctact gagctaaagc agaaatttaa agatatgaat gctgatgctg 1201 tctttgcatt tcaactacgc aacccagtgc acaatggaca tgccctgtta atgcaggata 1261 cccataagca acttctagag aggggctacc ggcgccctgt cctcctcctc caccctctgg 1321 gtggctggac aaaggatgac gatgttcctt tgatgtggcg tatgaagcag catgctgcag 1381 tgttggagga aggagttctg aatcctgaga cgacagtggt ggccatcttc ccatctccca 1441 tgatgtatgc tggaccaact gaggtccagt ggcattgcag agcacggatg gttgcaggag 1501 ccaactttta cattgttgga cgagaccctg ctggcatgcc tcatccagaa acagggaagg 1561 atctttatga gccaagtcat ggtgccaaag tgctgacgat ggcccctggt ttaatcactt 1621 tggaaatagt tccctttcga gttgcagctt acaacaagaa aaagaagcgt atggactact 1681 atgactctga acaccatgaa gactttgaat ttatttcagg aacacgaatg cgcaaacttg 1741 ctcgagaagg ccagaaacca cctgaaggtt tcatggctcc caaggcttgg accgtgctga 1801 cagaatacta caaatccttg gagaaagctt aggctgttaa cccagtcact ccacctttga 1861 cacattacta gtaacaagag gggaccacat agtctctgtt ggcatttctt tgtggtgtct 1921 gtctggacat gcttcctaaa aacagaccat tttccttaac ttgcatcagt tttggtctgc 1981 cttatgagtt ctgttttgaa caagtgtaac acactgatgg ttttaatgta tcttttccac 2041 ttattatagt tatattccta caatacaatt ttaaaattgt ctttttatat tatatttatg 2101 cttctgtgtc atgatttttt caagctgtta tattagttgt aaccagtagt attcacatta 2161 aatcttgctt tttttcccct taaaaaaaga aaaaaattac caaacaataa acttggctag 2221 accttgtttt gaggatttta caagaccttt gtagcgatta gatttttttt ctacattgaa 2281 aatagaaact gcttcctttc ttctttccag tcagctattg gtctttccag ctgttataat 2341 ctaaagtatt cttatgatct gtgtaagctc tgaatgaact tctttactca ataaaattaa 2401 ttttttggct tcttaaaaaa aaaaaaaaaa //