LOCUS BC011379 3775 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome 15 open reading frame 39, mRNA (cDNA clone MGC:9854 IMAGE:3866082), complete cds. ACCESSION BC011379 VERSION BC011379.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3775) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3775) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: e Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45120114. FEATURES Location/Qualifiers source 1..3775 /db_xref="H-InvDB:HIT000035230" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9854 IMAGE:3866082" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3775 /gene="C15orf39" /gene_synonym="DKFZP434H132" /gene_synonym="FLJ46337" /db_xref="GeneID:56905" /db_xref="HGNC:HGNC:24497" CDS 203..3346 /gene="C15orf39" /gene_synonym="DKFZP434H132" /gene_synonym="FLJ46337" /codon_start=1 /product="chromosome 15 open reading frame 39" /protein_id="AAH11379.2" /db_xref="GeneID:56905" /db_xref="HGNC:HGNC:24497" /translation="MAEKRPLRTLGPVMYGKLPRLETDSGLEHSLPHSVGNQDPCTYK GSYFSCPMAGTPKAESEQLASWTPYPPLYSTGMAGPPLQADNLLTNCLFYRSPAEGPE KMQDSSPVELLPFSPQAHSYPGPPLAAPKPVYRNPLCYGLSTCLGEGAVKRPLDVDWT LATGPLLPSADPPCSLAPAPSKGQTLDGTFLRGVPAEGSSKDSSGSFSPCQPFLEKYQ TIHSTGFLASRYTGPYPRNSKQAMSEGPSSPWTQLAQPLGPPCQDTGPTHYPPPHHPP PHPPQALPCPPACRHPEKQGSYSPALPLQPLGGHKGTGYQAGGLGSPYLRQQAAQAPY IPPLGLDAYPYPSAPLPAPSPGLKLEPPLTPRCPLDFAPQTLSFPYARDDLSLYGASP GLGGTPPSQNNVRAVPQPGAFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKL QPRLSEHSGPPIVIRDSPVPCTPPALPPCARECQSLPQKEDARPPSSPPMPVIDNVFS LAPYRDYLDVPAPEATTEPDSATAEPDSAPATSEGQDKGCRGTLPAQEGPSGSKPLRG SLKEEVALDLSVRKPTAEASPVKASRSVEHAKPTAAMDVPDVGNMVSDLPGLKKIDTE APGLPGVPVTTDAMPRTNFHSSVAFMFRKFKILRPAPLPAAVVPSTPTSAPAPTQPAP TPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPAPAPAPSPAPARAQAPASARD PAPAPAPVAGPAPASTSAPGDSLEQHFTGLHASLCDAISGSVAHSPPEKLREWLETAG PWGQAAWQDCQGVQGLLAKLLSQLQRFDRTHRCPFPHVVRAGAIFVPIHLVKERLFPR LPPASVDHVLQEHRVELRPTTLSEERALRELALPGCTSRMLKLLALRQLPDIYPDLLG LQWRDCVRRQLGDFDTEAGAVSSSEPTVARDEPESLALAQKSPAPKVRKPGRKPPTPG PEKAEAAAGEESCGASPTPATSASPPGPTLKARFRSLLETAWLNGLALPTWGHKSSRP DQPSPCPQLLDSQSHHL" BASE COUNT 711 a 1330 c 1042 g 692 t ORIGIN 1 ggcagctagg agggttgctc cgggcttggt gctcactgcg acttcccgcg cagggcccgg 61 tcggactagg acccgcggcc tgagagacgc tggaggatgc ggacgcggag gccgcctggg 121 gtagcggcgg cgggagtcct ggcgctctgc aggtcagaag ttgagtagca ggggcctagg 181 agggctcgaa gccttcacag cgatggcaga gaagcgaccc ctgagaaccc tggggcctgt 241 gatgtatggc aagctgcccc gcttagagac agactccggg ctcgagcaca gcctgcccca 301 ctctgttggt aaccaggatc cctgcaccta caaggggtcc tacttctcct gccccatggc 361 gggtactcct aaggccgagt ctgagcagtt ggcgtcctgg accccatacc cacccttgta 421 ctctaccggt atggcaggac ccccacttca ggcagacaac ctgctgacca actgcctgtt 481 ctaccgctcg ccagcagaag gccctgagaa gatgcaggac tccagccctg ttgagctcct 541 gcccttcagt ccccaggctc actcctaccc aggcccacca ctggcagcac ccaaacctgt 601 ctaccgcaac cctctgtgct atgggctctc aacttgtctg ggggaaggag cagtgaagag 661 gccactggat gttgactgga ctctggcgac tgggcccctg ttgccctcag ctgacccacc 721 ctgctctctg gccccagctc ctagcaaggg ccagactctg gatggcacct tcttgcgggg 781 ggtgccagct gaggggtcca gtaaagactc ctcagggagc ttctccccat gccagccctt 841 cctggagaaa tatcagacca tccacagcac gggcttcctg gcctccaggt acacaggtcc 901 ttaccctagg aactccaagc aagcaatgtc tgaggggccc tcaagtcctt ggacccagct 961 ggcccagccc ctggggccac cctgtcagga caccgggccc acccactacc caccacccca 1021 ccacccacca ccccaccctc cacaggccct gccttgccct ccagcctgtc gccacccaga 1081 gaagcagggc agctacagcc cagcactccc actgcagcct ctggggggcc acaaggggac 1141 cgggtaccag gctggtgggc tgggcagccc ctacctgagg cagcaggcag cccaggcacc 1201 ttacattccc ccactggggc tggacgctta cccctacccc tctgcccctc tcccagcacc 1261 ctctccaggc ctcaagctgg agccgcctct cactccacgg tgcccattgg actttgcccc 1321 ccagacactg agttttcctt atgcccggga tgacctctct ctctatggag catcccctgg 1381 gcttggaggg acaccacctt cccagaacaa tgtgagggct gtgccacagc ccggtgcctt 1441 ccagagggca tgccagcctt tgccagcgag ccagccctgc tcagagcctg tgaggcctgc 1501 acaggaagcc gaagagaaga cctggctgcc cagctgcagg aaagagaagc tccagccccg 1561 gctcagtgag cactctgggc cgcccatcgt catccgagac agtccagttc cctgtacccc 1621 cccagcactg cccccctgtg cccgggagtg ccagtctctt ccacagaagg aggacgcaag 1681 gccacccagc tctccaccaa tgcctgtcat tgacaatgtc ttcagcctgg ccccctaccg 1741 tgactatctg gatgtgccgg cacccgaggc cacaactgag cctgactctg ccacagctga 1801 gcctgactca gccccagcca ccagtgaagg tcaggacaaa ggctgcaggg ggaccctgcc 1861 tgcccaggag ggcccctcag ggagtaaacc cctaaggggc tcacttaagg aggaggtagc 1921 cctggatttg agtgtgagga agcccacagc agaggcctcc cctgtcaagg cttcccgttc 1981 tgtggagcat gccaagccta ctgcagccat ggatgtgcca gatgtgggca acatggtgtc 2041 agatctgcca ggcctgaaaa agatagacac agaagcacca ggcttgcctg gggtgccagt 2101 gaccacagat gccatgccaa ggaccaactt ccacagctct gtggccttca tgttccgaaa 2161 gttcaagatc ctccgtccgg cacctttgcc tgcagccgtg gtcccgtcca cgcccacctc 2221 agctcctgct cccacacagc ctgcacccac ccccacatct gggcccattg gactgcggat 2281 tctcgctcaa cagcccttgt ctgtgacctg cttcagcctg gcactgccca gccctccagc 2341 cgtagctgtg gcctcccctg cccctgctcc agctccatcc cctgctccgg ctcgagctca 2401 ggctccagct tcagcccggg atccagctcc agctccagct ccagttgcag gccctgctcc 2461 agcatctact tcagccccag gggactccct ggagcagcat tttacaggac tacatgcgtc 2521 cctgtgtgat gctatttctg gctccgtcgc ccactctcct ccagagaagc ttcgcgagtg 2581 gctagagacg gctgggccct ggggccaggc tgcgtggcag gactgccagg gtgtgcaggg 2641 gctgctggcc aagctgctgt ctcagctgca gcgcttcgat cgcacccacc ggtgcccctt 2701 cccccatgtg gtgcgagctg gcgccatctt cgtgcccatt cacctggtga aggagcggct 2761 cttccctcgg ctgccacccg cttctgtgga ccatgtgctg caggagcatc gtgtggagct 2821 gcggcccacc acgctgtcgg aggagcgggc actgcgggag ctcgccctgc caggctgcac 2881 ctcacgcatg ctgaagttac tggcgctgcg ccagctgccg gacatttacc ccgaccttct 2941 cggcctgcag tggcgcgact gtgtacgccg ccagctgggt gactttgaca ctgaggctgg 3001 agctgtgtcc tcctcagagc ccactgtggc cagagatgag ccagagagcc tagccctggc 3061 tcagaagtca ccggccccca aggtcaggaa gccaggcagg aagccaccaa cccctggccc 3121 ggagaaagca gaggcagctg ctggggaaga gtcctgtggt gcctccccta cccctgctac 3181 cagtgccagc ccacctggcc ccacactgaa ggcccgcttc cgcagtctgc tggagaccgc 3241 ctggctcaat ggcctggctc tgcccacctg gggccacaag tcctcaagac cagaccagcc 3301 ctcaccctgc ccacagctgc tggacagcca gagccatcac ctgtagcact ggttgccagt 3361 gctgtgtgta tagcagtcac tctccaccct tcccttctgc ctgcccagct gccccggggc 3421 cacgagtgga tgctggggct gtggctgctc ccctggaggg gttccatctc tgaccctgtg 3481 gcccattcag ggtgggctga agagcccctg agcttttaac gtgagggtct ttattggata 3541 ggactactcc ctatttcttg cctagagaac acacatgggc tttggagccc gacagacctg 3601 ggcttgaatc ccggctcgtg ttcttgctgc aggacctggg caagaaactt cacctctgct 3661 gagccctcat tccccatgtg taaaatggga caacgcaacc tacctcacag ggttgttgtg 3721 gggatgctgc ctgatacata ccctgtcccc aaaaaaaaaa aaaaaaaaaa aaaaa //