LOCUS BC011361 1902 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens olfactomedin 2, mRNA (cDNA clone MGC:17123
IMAGE:4213407), complete cds.
ACCESSION BC011361
VERSION BC011361.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1902)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1902)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17157992.
FEATURES Location/Qualifiers
source 1..1902
/db_xref="H-InvDB:HIT000035217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17123 IMAGE:4213407"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1902
/gene="OLFM2"
/gene_synonym="NOE2"
/gene_synonym="NOELIN2"
/gene_synonym="NOELIN2_V1"
/gene_synonym="OlfC"
/db_xref="GeneID:93145"
/db_xref="HGNC:HGNC:17189"
CDS 32..1396
/gene="OLFM2"
/gene_synonym="NOE2"
/gene_synonym="NOELIN2"
/gene_synonym="NOELIN2_V1"
/gene_synonym="OlfC"
/codon_start=1
/product="olfactomedin 2"
/protein_id="AAH11361.1"
/db_xref="GeneID:93145"
/db_xref="HGNC:HGNC:17189"
/translation="MWPLTVPPPLLLLLCSGLAGQTLFQNPEEGWQLYTSAQAPDGKC
ICTAVIPAQSTCSRDGRSRELRQLMEKVQNVSQSMEVLELRTYRDLQYVRGMETLMRS
LDARLRAADGSLSAKSFQELKDRMTELLPLSSVLEQYKADTRTIVRLREEVRNLSGSL
AAIQEEMGAYGYEDLQQRVMALEARLHACAQKLGCGKLTGVSNPITVRAMGSRFGSWM
TDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDFIKGQNFIQHLLPQPWAGTGHVVYNG
SLFYNKYQSNVVVKYHFRSRSVLVQRSLPGAGYNNTFPYSWGGFSDMDFMVDESGLWA
VYTTNQNAGNIVVSRLDPHTLEVMRSWDTGYPKRSAGEAFMICGVLYVTNSHLAGAKV
YFAYFTNTSSYEYTDVPFHNQYSHISMLDYNPRERALYTWNNGHQVLYNVTLFHVIST
SGDP"
BASE COUNT 353 a 597 c 510 g 442 t
ORIGIN
1 ctaggtcggg acgccgggct aggggcgcgt catgtggccg ctcacggtcc cgccgccgct
61 gctgctgctg ctgtgctcag gcctggccgg acagactctc ttccagaacc cagaagaggg
121 ctggcagctg tacacctcag cccaggcccc tgacgggaaa tgcatctgca cggccgtgat
181 cccagcgcag agtacctgct ctcgagatgg caggagtcgg gagctgcggc aactgatgga
241 gaaggtccag aacgtctccc agtccatgga ggtccttgag ttgcggacgt atcgcgacct
301 ccagtatgta cgcggcatgg agaccctcat gcggagcctg gatgcgcggc tccgggcagc
361 tgatgggtcc ctctcggcca agagcttcca ggagctgaag gacaggatga cggaactgtt
421 gcccctgagc tcggtcctgg agcagtacaa ggcagacacg cggaccattg tacgcttgcg
481 ggaggaggtg aggaatctct ccggcagtct ggcggccatt caggaggaga tgggtgccta
541 cgggtatgag gacctgcagc aacgggtgat ggccctggag gcccggctcc acgcctgcgc
601 ccagaagctg ggctgtggga agctgaccgg ggtcagtaac cccatcaccg ttcgggccat
661 ggggtcccgc ttcggctcct ggatgactga cacgatggcc cccagtgcgg atagccgggt
721 ctggtacatg gatggctatt acaaaggccg ccgggtcctg gagttccgta ccctgggaga
781 cttcatcaaa ggccagaact ttatccagca cctgctgccc cagccgtggg cgggcacggg
841 ccacgtggtg tacaacggct ccctgttcta taacaagtac cagagcaacg tggtggtcaa
901 ataccacttc cgctcgcgct ctgtgctggt gcagaggagc ctcccgggcg ccggttacaa
961 caacaccttc ccctactcct ggggcggctt ctccgacatg gacttcatgg tggacgagag
1021 cgggctctgg gctgtgtaca ccaccaacca gaacgcgggc aacatcgtgg tcagccggct
1081 ggacccgcac accctcgagg tcatgcggtc ctgggacacc ggctacccca agcgcagcgc
1141 tggcgaggcc ttcatgatct gcggtgtgct ctacgtgacc aactcccacc tggctggggc
1201 caaggtctac ttcgcctatt ttaccaacac gtccagttac gagtacacgg acgtgccctt
1261 ccacaaccag tattcccaca tctcgatgct ggattacaac ccccgggagc gcgccctcta
1321 tacctggaac aacggccacc aggtgctcta caatgtcacc ctgtttcacg tcatcagcac
1381 ctctggggac ccctgagcca atgctgtggc tcgggctgct gcctgggggg cctccggggg
1441 ctgggggccc ttttcattct gcctgtgtcc ctcaagggtg atctctctgt ctctgtcacg
1501 ccctttctcc ccgccttttt gctgggcttt tgttctctgc ctatgtattt ctgtctattt
1561 tttcaatttc ccctcttctc ctttattgat ctctgctttt aatacaccac ttctttcttt
1621 ctgccttttt atggatgtct ttttcttttt atggctctgg ttctccagtt ctttccgtct
1681 ctgcctctct ctgtctctct ctctctgtcc ttccacccct ccctccttgc ttcccaccca
1741 ttcctcatcc ctcactccca cccccacccc cacccccagg agttgagtgc atggatctgt
1801 ttcttttttt atttacactt tttctttccg gtttgccgga ataaacagga cctttgacat
1861 ttgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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