LOCUS BC011268 1999 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens phytanoyl-CoA 2-hydroxylase interacting protein-like, mRNA (cDNA clone MGC:18231 IMAGE:4156912), complete cds. ACCESSION BC011268 VERSION BC011268.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1999) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1999) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC011268.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: e Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33469020. FEATURES Location/Qualifiers source 1..1999 /db_xref="H-InvDB:HIT000035208" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:18231 IMAGE:4156912" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1999 /gene="PHYHIPL" /gene_synonym="KIAA1796" /db_xref="GeneID:84457" /db_xref="HGNC:HGNC:29378" CDS 106..1236 /gene="PHYHIPL" /gene_synonym="KIAA1796" /codon_start=1 /product="phytanoyl-CoA 2-hydroxylase interacting protein-like" /protein_id="AAH11268.2" /db_xref="GeneID:84457" /db_xref="HGNC:HGNC:29378" /translation="MEVPRLDHALNSPTSPCEEVIKNLSLEAIQLCDRDGNKSQDSGI AEMEELPVPHNIKISNITCDSFKISWEMDSKSKDRITHYFIDLNKKENKNSNKFKHKD VPTKLVAKAVPLPMTVRGHWFLSPRTEYTVAVQTASKQVDGDYVVSEWSEIIEFCTAD YSKVHLTQLLEKAEVIAGRMLKFSVFYRNQHKEYFDYVREHHGNAMQPSVKDNSGSHG SPISGKLEGIFFSCSTEFNTGKPPQDSPYGRYRFEIAAEKLFNPNTNLYFGDFYCMYT AYHYVILVIAPVGSPGDEFCKQRLPQLNSKDNKFLTCTEEDGVLVYHHAQDVILEVIY TDPVDLSLGTVAEITGHQLMSLSTANAKKDPSCKTCNISVGR" BASE COUNT 624 a 422 c 367 g 586 t ORIGIN 1 tccctccctc tgccactccc cctccctttc ccgctcttct tgcccacccg gccggcagag 61 agagcctgga tacgaagcag gcgggcttca gagtgggttg gaaaaatgga ggtgccgcgc 121 ctggatcatg ccctcaacag ccccaccagc ccctgtgagg aggtgatcaa aaacctcagc 181 ctggaggcca ttcagctgtg cgaccgggac gggaacaaat cacaagacag tggcatagca 241 gagatggaag aacttcctgt accacataac atcaaaataa gcaatataac gtgtgactca 301 ttcaagattt catgggaaat ggattcaaaa tcaaaggatc gcattacaca ctattttatt 361 gacctcaaca agaaagagaa caagaactcc aataaattta aacacaagga tgttcccaca 421 aaattggtgg caaaagctgt tcccttgcct atgactgtcc gtggacactg gtttttaagc 481 ccaagaactg aatatacagt agcagtgcag actgcctcaa aacaagttga tggtgattat 541 gttgtgtctg aatggagtga aattatagaa ttctgcaccg cagactattc aaaagttcat 601 ctaacacaat tgttggagaa ggctgaagtg attgcaggac gcatgcttaa gttttctgtt 661 ttttatcgta atcagcacaa agaatatttt gactatgttc gagaacatca tgggaatgct 721 atgcagccat ctgtcaagga taacagtggt agccatggct ctcctatcag tggaaaatta 781 gaaggcatct tcttcagctg cagcactgaa ttcaatactg gaaagccacc ccaggattca 841 ccttatggaa gatacaggtt tgagattgcc gcagaaaaac tttttaaccc caatactaac 901 ttatactttg gggacttcta ctgtatgtac actgcttatc attatgtgat tcttgttatt 961 gctcctgtgg gatcaccagg agatgaattt tgtaagcagc gccttcctca actaaattct 1021 aaggataata aatttttgac ctgtacagaa gaagatgggg tgctggttta ccaccatgcc 1081 caggatgtca ttttagaagt catttacact gaccctgtgg atctttctct gggcaccgtg 1141 gcagaaatca ctggtcatca gctcatgagt ttgtctactg caaatgcaaa gaaagatccc 1201 agctgcaaaa cctgtaatat cagtgttgga cgttaatgcc cacttttctt attcttactc 1261 agcccctttt cctcccttag gagcattggt cctctgttgt ccatttttat caccagatgt 1321 tttccactga agcatgcaca tgccactgtc accaaaacaa acaactacca ctttccaaat 1381 ttcattcaga accattttag tgttttccta ttccctaccc ctcccactac tttcaatgat 1441 gaaataccct aagttaagtt ctccttttga cactttattg cctagatgct gcaatgtttt 1501 tatgtttcct ttatgccaaa cataacaaaa cagttatata gactgcttta gcaaagtaca 1561 caataatggc ttataaatgg tgtttaaata tgcattcatt ttaatctact gaacaaatat 1621 tgggataact ccaaaccgca tgaaagggtg taattgcagc atgagttaaa tcttgaagcc 1681 tagaattgtc agcacttcca acttcttgtt tgacagtgtt atttatgtta tttatattag 1741 ctaacaggaa acaactactg tgtttcaaca taataaatat aatagaaaaa tattttattt 1801 gtattgttgt ataaaatatt tacaatcata tagaatatat agagttacat tttaatagca 1861 actgtgtaca tgtcacgaaa ccatttccct tatcaaagat gtaatttgta aacctcaaat 1921 agttgtgtat ctgtcctgtt agaagtagat gacttcaatt aaacaaattt atgaaggaaa 1981 aaaaaaaaaa aaaaaaaaa //