LOCUS BC011179 1963 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens amylase, alpha 2B (pancreatic), mRNA (cDNA clone MGC:17195 IMAGE:4150646), complete cds. ACCESSION BC011179 VERSION BC011179.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1963) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1963) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: m Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21359830. FEATURES Location/Qualifiers source 1..1963 /db_xref="H-InvDB:HIT000035191" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17195 IMAGE:4150646" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1963 /gene="AMY2B" /db_xref="GeneID:280" /db_xref="HGNC:HGNC:478" /db_xref="MIM:104660" CDS 365..1900 /gene="AMY2B" /codon_start=1 /product="amylase, alpha 2B (pancreatic)" /protein_id="AAH11179.1" /db_xref="GeneID:280" /db_xref="HGNC:HGNC:478" /db_xref="MIM:104660" /translation="MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECE RYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCN NVGVRIYVDAVINHMSGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGS GDIENYNDATQVRDCRLVGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMW PGDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAK LGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDAR LYKMAVGFMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTT CGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWT FSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAE SKL" BASE COUNT 594 a 336 c 447 g 586 t ORIGIN 1 aaatggttca gctcttagtt atttttaaac taatgacctg tgttatactt cctattttta 61 atgggctttt atgatgtttt aggttttttt gaatcccgtg tccttcaagt gctttctaac 121 tttgagagga agaaattgac cacctggact atggaacttt ggttgaatct ggcgatgtgg 181 aacccatgga tatggagggc tgactatata caccatgttt tttcctggca catcactcaa 241 ctactattag ctggcgagtc aactcacgtt gttggaatga ctagggacaa ctagacttca 301 agtgatcttt catcccagga atataaatag tttctggaaa ggacactgac aacttcaaag 361 caaaatgaag ttctttctgt tgcttttcac cattgggttc tgctgggctc agtattcccc 421 aaatacacaa caaggacgga catctattgt tcatctgttt gaatggcgat gggttgatat 481 tgctcttgaa tgtgagcgat atttagctcc caagggattt ggaggggttc aggtctctcc 541 accaaatgaa aatgttgcaa ttcacaaccc tttcagacct tggtgggaaa gataccaacc 601 agttagctat aaattatgca caagatctgg aaatgaagat gaatttagaa acatggtgac 661 tagatgtaac aatgttgggg ttcgtattta tgtggatgct gtaattaatc atatgtctgg 721 taatgctgtg agtgcaggaa caagcagtac ctgtggaagt tacttcaacc ctggaagtag 781 ggactttcca gcagtcccat attctggatg ggattttaat gatggtaaat gtaaaactgg 841 aagtggagat atcgagaact acaatgatgc tactcaggtc agagattgtc gtctggttgg 901 tcttcttgat cttgcactgg agaaagatta tgtgcgttcc aagattgccg aatatatgaa 961 tcatctcatt gacattggtg ttgcagggtt cagacttgat gcttccaagc acatgtggcc 1021 tggagacata aaggcaattt tggacaaact gcataatcta aacagtaact ggttccctgc 1081 aggaagtaaa cctttcattt accaggaggt aattgatctg ggtggtgagc caattaaaag 1141 cagtgactac tttggaaatg gccgggtgac agaattcaag tatggtgcaa aactcggcac 1201 agttattcgc aagtggaatg gagagaagat gtcttaccta aagaactggg gagaaggttg 1261 gggtttcatg ccttctgaca gagcacttgt ctttgtggat aaccatgaca atcaacgagg 1321 acatggggct ggaggagcct ctattcttac cttctgggat gctaggctgt ataaaatggc 1381 agttggattt atgcttgctc atccttatgg ttttacacga gtaatgtcaa gctaccgttg 1441 gccaagacag tttcaaaatg gaaacgatgt taatgattgg gttgggccac caaataataa 1501 tggagtaatt aaagaagtta ctattaatcc agacactact tgtggcaatg actgggtctg 1561 tgaacatcga tggcgccaaa taaggaacat ggttaatttc cgcaatgtag tggatggcca 1621 gccttttaca aactggtatg ataatgggag caaccaagtg gcttttggga gaggaaacag 1681 aggattcatt gttttcaaca atgatgactg gacattttct ttaactttgc aaactggtct 1741 tcctgctggc acatactgtg atgtcatttc tggagataaa attaatggca attgcacagg 1801 cattaaaatc tacgtttctg acgatggcaa agctcatttt tctattagta actctgctga 1861 ggatccattt attgcaattc atgctgaatc taaattataa aatttaaaat taaatgcata 1921 tcctcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //