LOCUS BC011145 1925 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA
clone IMAGE:3451454), partial cds.
ACCESSION BC011145
VERSION BC011145.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: o Column: 17.
FEATURES Location/Qualifiers
source 1..1925
/db_xref="H-InvDB:HIT000087601"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451454"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1925
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
CDS <1..1362
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/codon_start=1
/product="SNAP47 protein"
/protein_id="AAH11145.1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
/translation="GAERPRRRGRLWDSSGVPQRQKRPGPWRTQTQEQMSRDVCIHTW
PCTYYLEPKRRWVTGQLSLTSLSLRFMTDSTGEILVSFPLSSIVEIKKEASHFIFSSI
TILEKRHAKHWFSSLRPSRNVVFSIIEHFWRELLLSQPGAVADASVPRTRGEELTGLM
AGSQKRLEDTARVLHHQGQQLDSVMRGLDKMESDLEVADRLLTELESPAWWPFSSKLW
KTPPETKPREDVSMTSCEPFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHDS
SSLLMHRFEREDVDDIKVHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSK
KMELLEDALVLRSARTSSPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSL
PALSEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMK
RLT"
BASE COUNT 456 a 525 c 551 g 393 t
ORIGIN
1 ggcgccgagc ggccgaggcg ccgcggtcgg ctctgggact cgtctggcgt ccctcagagg
61 cagaagaggc ctggaccttg gcgcacacag acccaggaac agatgagcag ggatgtctgc
121 atccacacct ggccgtgcac ctactacctg gagcccaaga ggcgatgggt tactggacag
181 ctgtccttaa catcgctgtc gctcaggttc atgactgaca gcactggaga gattctggtc
241 agcttccccc tctccagcat agttgagatc aagaaggagg cttcacattt tatcttcagc
301 tccatcacca tcctggagaa gcgccatgcc aagcactggt tcagctccct gcggccaagt
361 cgaaatgtgg tcttcagcat catcgagcat ttctggaggg agctgctgct gtctcagcct
421 ggagccgtgg cagacgcatc tgtcccaagg acccggggcg aggagctgac gggactcatg
481 gctggatccc agaaacgcct ggaggacacg gcgagggtcc tgcaccacca gggccagcag
541 ctggacagcg tcatgagagg cctggacaag atggagtcag acctggaggt ggcggacaga
601 ttgctgacag aactggaatc tcctgcttgg tggcccttta gctccaagct ttggaagaca
661 ccaccggaaa caaagcccag ggaagatgtc tccatgacca gttgtgaacc ctttgggaaa
721 gaagggatac tgataaaaat tcctgctgtt atttcccaca gaacagagtc tcacgttaaa
781 ccagggaggc tcaccgtcct tgtgtctggg ttggaaatac atgactccag ttctttgctc
841 atgcacaggt ttgaaagaga agacgtggac gacatcaagg tccactcacc ttacgaaatt
901 agcatccgcc agcggtttat tggaaagcca gacatggcct atcgtttgat atctgccaag
961 atgccagagg ttatccccat tttagaagtg cagttcagca agaagatgga gctgttagaa
1021 gatgcattgg tgctcagaag cgcaagaacc tcttcccccg cagagaagag ctgctcagtc
1081 tggcatgcag catctgggct gatgggccgt accctgcacc gtgagccacc cgcaggagac
1141 caggagggca cagcactgca cctgcagaca agcctgccag ccctttctga ggcagatacc
1201 caggaactaa cccagatcct gaggaggatg aaggggctgg ccctggaggc cgagagtgag
1261 ctggagagac aagacgaagc cctggatggc gttgcagcag ctgtggacag ggcaaccttg
1321 accatcgaca agcacaacag gcggatgaag aggctgacct aggggcagaa cgtccctgca
1381 ttcctgtctc accctgcaca tcccgctgag atggagggct gggcggcagt gccagggctg
1441 cagaggcctg tggccctccg gagtggtctt cctctggatg gggctgctac tgtggggctg
1501 cttctgcacc aggggcctcc ccaggtgtgc accatgcctg cctcccactt ggctgtccct
1561 gctgctgggc aggacccggc cacatgttct gcggatgctg cagaagtgtg gaccatggcg
1621 ggaccccaag gacacttggc acaggcctgg aagaggccgc cctcgtcttg tctcggctcc
1681 ctttcatgga cagactggcc ttcttagctg tactataaat ttgtgagtga agttagagcc
1741 cagctcactt agccagctca ctttgagggc atcctataaa cacccaactg ttcttttatc
1801 gtctcggttt tagccaaaag tgaaattagc atgactgcat ctttcaaaca aaaatattga
1861 tttctgcttt tagggccccg tttccatcca gaaataaagg gaaatgctgg aaaaaaaaaa
1921 aaaaa
//