LOCUS BC011143 1996 bp mRNA linear HUM 24-NOV-2004
DEFINITION Homo sapiens SET binding factor 2, mRNA (cDNA clone IMAGE:3451384),
partial cds.
ACCESSION BC011143
VERSION BC011143.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1996)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1996
/db_xref="H-InvDB:HIT000087600"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451384"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1996
/gene="SBF2"
/gene_synonym="CMT4B2"
/gene_synonym="KIAA1766"
/gene_synonym="MTMR13"
/db_xref="GeneID:81846"
/db_xref="MIM:607697"
CDS <1..304
/gene="SBF2"
/gene_synonym="CMT4B2"
/gene_synonym="KIAA1766"
/gene_synonym="MTMR13"
/codon_start=2
/product="SBF2 protein"
/protein_id="AAH11143.1"
/db_xref="GeneID:81846"
/db_xref="MIM:607697"
/translation="LYKRGALLKGWKPRWFVLDVTKHQLRYYDSGEDTSCKGHIDLAE
VEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNFCAQDGQSAQQWMDKIQSCISDA"
BASE COUNT 656 a 399 c 370 g 571 t
ORIGIN
1 actttataaa agaggggctt tgctgaaagg ttggaagccc cgttggtttg ttttggatgt
61 aacaaaacat cagctgcgct actatgactc aggtgaggac acaagctgta aaggccacat
121 tgatctggct gaagtagaaa tggtcatccc tgctggcccc agcatgggag ccccaaagca
181 cacaagtgac aaggctttct ttgatctcaa gaccagcaaa cgtgtgtata acttctgcgc
241 ccaggatgga cagagtgccc agcaatggat ggacaagatc cagagttgta tctctgatgc
301 ctgatgccca tggtcaaccc acgcagaaga aacagaagaa ctcatgctgc cagatagata
361 gaaaaagaag catggatcct tgaggagctg acaacaagtt atcccagggc ctgaggttct
421 cctgcccagt cccctcttgc aggggttgct atatctactt aacctgaata ggtgtttcac
481 acaggtctgg tcaacagccc catgcactcc ctgtatcttg cactaaattt ttctaacagg
541 gtcttagtgg ttaatgatca gaagatgtct cctgagccaa ctgtgaacct cacccaggca
601 aaatggctac cacctacttg ggtccttctt catgaaagct atagatcctt ttttgttctc
661 tgaggtcata atttcctcgg agacctgttt aacaagcaaa aatcaaaacc ctccaagatt
721 gtctcatatt ctacctggac taggtttcct atgagagaca tctacttgta atgcctgacc
781 tttgagatgc tcagttctct ggtgctgcca aaagatgttt ccatggtccg tgctctgcca
841 gtggggttca caacaagaga cgtcattgtt cagtagcagg caaagaggga gcacacagca
901 ttattctgat ggaaaaagat tatccaggga atggtacaac aatgaccagc ccaatgcagg
961 aaaacactac ttccaaaaca ctgaattctc tagaccagag gtgctctgag gatccagggc
1021 cttgtgttct tatgtatctt ctgcttcctg acagcttctt tttcaaaata acatgcaaaa
1081 aaagctgaat gcactaactc acaaaacaaa cacttgcact gaattcccaa tgaagtgaag
1141 atgttggaaa gacagaggcc agctatttag gaccatacgc acctgtgaca agggctgtgt
1201 tgaccacagt cacactgtgg catgactgga tacccaaact acacttctac acatgaaaag
1261 taagaactgt ctttagattt tctttacttt gataacttgt gattgtttag cttaagaccc
1321 aagaaatgct gtttgctcat ggtaaacaga aacagcatct tcgctacaac cactgacacc
1381 agctggcgtc ataggtagct agatcattgc atttgttttg aaatgttaat atgttaaata
1441 ctaaactaat atttcaaaaa tgtgtatata tgatttctat atccttgttt ttcagatagc
1501 ctgcttataa tttaatataa attaactgat gcattcataa gatttcaata atgaaatggt
1561 tcccttttaa aaaataaaaa tactttgtag attaaaaata aatcagaatt tcaaatttaa
1621 aattgtccac acactaggaa atagaactgt gttaatatat aagaaatttg gggataatta
1681 agaatgaagg acttttctat catttccatt ttataaattg ccacctgtga aaatggtttt
1741 tgcacattat ttgtattttt ctttgtatat gaaataattt tttgtacttt gtaaaatatg
1801 gagcccattg taccttcaac tatttgagac tatacacagt gcttcttttg taactggatt
1861 actttaactt tcgtgaaggc attacattgc ctcacattca ctaaccacct tgaattaaat
1921 ttatttctta agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaa
//