LOCUS BC011017 1458 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, mRNA (cDNA clone MGC:13498 IMAGE:4287132), complete cds. ACCESSION BC011017 VERSION BC011017.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1458) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1458) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: n Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32171179. FEATURES Location/Qualifiers source 1..1458 /db_xref="H-InvDB:HIT000035166" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13498 IMAGE:4287132" /tissue_type="Brain, primitive neuroectodermal" /clone_lib="NIH_MGC_56" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1458 /gene="SMARCE1" /gene_synonym="BAF57" /db_xref="GeneID:6605" /db_xref="HGNC:HGNC:11109" /db_xref="MIM:603111" CDS 126..1361 /gene="SMARCE1" /gene_synonym="BAF57" /codon_start=1 /product="SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1" /protein_id="AAH11017.1" /db_xref="GeneID:6605" /db_xref="HGNC:HGNC:11109" /db_xref="MIM:603111" /translation="MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGN PSTNSRVTASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGG MWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQR QSRMEKGEPYMSIQPAEDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSV VTTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGL KVEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERSQSSIVPEEEQAANKGEEKKD DENIPMETEETHLEETTESQQNGEEGTSTPEDKESGQEGVDSMAEEGTSDSNTGSESN SATVEEPPTDPIPEDEKKE" BASE COUNT 498 a 309 c 385 g 266 t ORIGIN 1 ggggccggac gcgaggggcg gggcgagcgc gggacaaagg gaagcgaagc cggagctgcg 61 ggcgcttttt ctgcccgcgg tgtctcagat tcattcttaa ggaactgaga acttaatctt 121 ccaaaatgtc aaaaagacca tcttatgccc cacctcccac cccagctcct gcaacacaaa 181 tgcccagcac accagggttt gtgggataca atccatacag tcatctcgcc tacaacaact 241 acaggctggg agggaacccg agcaccaaca gccgggtcac ggcatcctct ggtatcacga 301 ttccaaaacc cccaaagcca ccagataagc cgctgatgcc ctacatgagg tacagcagaa 361 aggtctggga ccaagtaaag gcttccaacc ctgacctaaa gttgtgggag attggcaaga 421 ttattggtgg catgtggcga gatctcactg atgaagaaaa acaagaatat ttaaacgaat 481 acgaagcaga aaagatagag tacaatgaat ctatgaaggc ctatcataat tcccccgcgt 541 accttgctta cataaatgca aaaagtcgtg cagaagctgc tttagaggaa gaaagtcgac 601 agagacaatc tcgcatggag aaaggagaac cgtacatgag cattcagcct gctgaagatc 661 cagatgatta tgatgatggc ttttcaatga agcatacagc caccgcccgt ttccagagaa 721 accaccgcct catcagtgaa attcttagtg agagtgtggt gccagacgtt cggtcagttg 781 tcacaacagc tagaatgcag gtcctcaaac ggcaggtcca gtccttaatg gttcatcagc 841 gaaaactaga agctgaactt cttcaaatag aggaacgaca ccaggagaag aagaggaaat 901 tcctggaaag cacagattca tttaacaatg aacttaaaag gttgtgcggt ctgaaagtag 961 aagtggatat ggagaaaatt gcagctgaga ttgcacaggc agaggaacag gcccgcaaaa 1021 ggcaggagga aagggagaag gaggccgcag agcaagctga gcgcagtcag agcagcatcg 1081 ttcctgagga agaacaagca gctaacaaag gcgaggagaa gaaagacgac gagaacattc 1141 cgatggagac agaggagaca caccttgaag aaacaacaga gagccaacag aatggtgaag 1201 aaggcacgtc tactcctgag gacaaggaga gtgggcagga gggggtcgac agtatggcag 1261 aggaaggaac cagtgatagt aacactggct cggagagcaa cagtgcaaca gtggaggagc 1321 caccaacaga tcccatacca gaagatgaga aaaaagaata agtgttgcct tgttttgtgt 1381 gttctaaata ctttttttaa tgaaaaaatg ttttttggtt ttaatgggga aaaaaaaaaa 1441 aaaaaaaaaa aaaaaaaa //